PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15439
Common NameKK1_015883
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 452aa    MW: 51153.9 Da    PI: 7.1744
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15439genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM115.65e-36471891128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tks 80 
                    lp+G++F+Ptd+el+ e+L++kve+k+++ +        +i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+          +
  C.cajan_15439  47 LPAGVKFDPTDQELI-EHLEAKVEAKNMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqnecdlqGGE 140
                    799************.99*********5553344444434666646**********.555666799******************845555544337 PP

            NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  C.cajan_15439 141 TRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 189
                    78************.999***********5547999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.12E-3843208IPR003441NAC domain
PROSITE profilePS5100533.08247208IPR003441NAC domain
PfamPF023653.0E-1648189IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MSKMSNLSSV SSSDLIDAKL EEHQLCGSKQ CPGCGHKFEG KPDWLGLPAG VKFDPTDQEL  60
IEHLEAKVEA KNMKSHPLID EFIPTIEGED GICYTHPEKL PGVTRDGLSR HFFHRPSKAY  120
TTGTRKRRKI QNECDLQGGE TRWHKTGKTR PVMVNGKQKG CKKILVLYTN FGKNRKPEKT  180
NWVMHQYHLG QHEEEKEGEL VVSKIFYQTQ PRQCNWSDRS ATTGEGSGEP NNSGRRDSGS  240
GSCSSKEIVT HRDEMSAVVG VPPITSFTHH HPLDIQHLKP DHFSFIPFRK SFDEVGIGEA  300
STAREVVQAS GSCEEVHERQ RPQHVAHHHQ QQHQQHQHAH HQISNSAFHI SRPSHPISTI  360
ISPPPLHHTS IILDDNSYHV SRIMLQNENF QQQQQQHHHK LGGRSASGLE ELIMGCTSTE  420
IKEESSITNP QEAEWLKYSS YWPDPDNPDH HG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-134518913140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00460DAPTransfer from AT4G29230Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15439
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220271.10.0NAC domain-containing protein 75
RefseqXP_020220272.10.0NAC domain-containing protein 75
RefseqXP_020220273.10.0NAC domain-containing protein 75
RefseqXP_029128423.10.0NAC domain-containing protein 75
TrEMBLA0A151T2Y20.0A0A151T2Y2_CAJCA; NAC domain-containing protein 8
STRINGGLYMA01G00880.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45203458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56620.11e-122NAC domain containing protein 99