PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_12210
Common NameKK1_012583
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 381aa    MW: 42159.8 Da    PI: 7.6153
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_12210genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.5e-174594255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  C.cajan_12210 45 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 94
                   59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.2E-2145102IPR016177DNA-binding domain
PROSITE profilePS5103222.11545102IPR001471AP2/ERF domain
CDDcd000185.54E-3045101No hitNo description
Gene3DG3DSA:3.30.730.102.1E-2945101IPR001471AP2/ERF domain
PfamPF008474.2E-114594IPR001471AP2/ERF domain
SMARTSM003802.1E-3345108IPR001471AP2/ERF domain
PRINTSPR003672.1E-94657IPR001471AP2/ERF domain
PRINTSPR003672.1E-96884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MEDAMRRLNG ADPKIDGGGV ADNPKRSAVN KRALRENDGG GGAMRYRGVR RRPWGRYAAE  60
IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPTSPVNP CSATEHLFPS  120
FNFPKHVHSQ KPPFANNHQH RHFTFDPHAV DFSAPRNPSL NMLLFRDLIN PSSNPSLLSS  180
TNNHFHNNKT LASSLSSLPS PSSLAPCYSN TSFGASSSDN INTLCGTSFA DDNDGSGFFS  240
RESSDSGLLE EIVNKFLPKT KPNKSDGLPK METFSFRNPQ ESLLPPLVSD STVVSTAQCY  300
NSDTKKGFPK NENLSVFSFD HHHQGFPMQQ LDNFNNGFNS LQGVSLGNEQ VMMNHAENCV  360
VDDVFPYPEL LNAFAIRMQN A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-19451011471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_12210
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN5902433e-71JN590243.1 Glycine max ethylene-responsive transcription factor ESR1 (ESR1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020217912.10.0ethylene-responsive transcription factor ESR2
TrEMBLA0A151TGW70.0A0A151TGW7_CAJCA; Ethylene-responsive transcription factor ESR2
STRINGGLYMA01G03110.21e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.11e-15DORNROSCHEN-like