PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10032
Common NameKK1_010316
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 575aa    MW: 65803.7 Da    PI: 6.3542
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10032genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.69.1e-30122207187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  C.cajan_10032 122 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 207
                    8*************************************999*****************************98..55667*******85 PP

2trihelix41.63.3e-13422501284
       trihelix   2 WtkqevlaLiearremeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                    W+++e+  L ++r eme+r+  +g++++  Wee++ km+  g+ers+   kekwe ++ +    k+g+kkr +e+s+ c +fd+
  C.cajan_10032 422 WPESEITRLQQLRAEMETRYIqNGCSEEVMWEEIATKMACFGYERSALVFKEKWETMSSY---AKDGNKKR-KENSRGCFFFDN 501
                    ******************986269**********************************98...56777776.567789999985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.12115180IPR017877Myb-like domain
SMARTSM007170.31119182IPR001005SANT/Myb domain
PfamPF138371.5E-20122208No hitNo description
CDDcd122034.60E-20122187No hitNo description
SMARTSM0071722418481IPR001005SANT/Myb domain
PfamPF138374.1E-10420503No hitNo description
PROSITE profilePS500905.575421479IPR017877Myb-like domain
CDDcd122031.21E-15422484No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 575 aa     Download sequence    Send to blast
MEMEDHHHHH HHHEQQQQQY GITDLRQLSS HFPSMPPQPT AELFPAGHPN LAATQHYEMM  60
MFGRQVADIM PRCLHDFAST DSATNTTIAV ATPTTTSAST PPLSCLEAET AGCIAGDAST  120
GRWPRQETLT LLEIRSRLDS KFKEANQKGP LWDEVSRIMS EEHGYQRSGK KCREKFENLY  180
KYYKKTKEGK AGRQDGKHYR FFRQLEALYG ENSNQASVPE TNFGSSSLRF HTSSHTNPSQ  240
TNQEMFQSQK HCDSLSLTNS TDLDTSSSDD NDQNSTGGLK DNDSMEKRRK RVSGRSWKVK  300
IKDFIDSQMK KLVEKQEEWL DKLTKTLEQK EKERVLREEE WRRQEAARLE REHKFWAKER  360
AWIEARDAAL MEALQKLTGN EIKSTQSPEG LMVTGIQNHS ENQNEDGSEI LNSTIARGAE  420
SWPESEITRL QQLRAEMETR YIQNGCSEEV MWEEIATKMA CFGYERSALV FKEKWETMSS  480
YAKDGNKKRK ENSRGCFFFD NSDQSSLYNQ GGSYCDINDQ RHETGRMQTN DGSSPSNSNV  540
GNAVAGDNCF PFLMAEGGNL WENYSLKVNK ANQNQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10032
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213533.10.0trihelix transcription factor PTL
SwissprotQ9LZS01e-144PTL_ARATH; Trihelix transcription factor PTL
TrEMBLA0A151TVI50.0A0A151TVI5_CAJCA; Uncharacterized protein
STRINGGLYMA19G37660.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20223489
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-121Trihelix family protein
Publications ? help Back to Top
  1. Quon T,Lampugnani ER,Smyth DR
    PETAL LOSS and ROXY1 Interact to Limit Growth Within and between Sepals But to Promote Petal Initiation in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 152
    [PMID:28228771]