PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_09909
Common NameKK1_010193
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 395aa    MW: 45304.1 Da    PI: 9.6864
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_09909genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix76.83.4e-24109207186
       trihelix   1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 
                    +Wt+ +v++Li a+ +++++ +++             +kk++W++vs+ m+e+g+ +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++d
  C.cajan_09909 109 KWTDTMVRLLIMAVYYIGDEAGSEGtdptkkkatgllQKKGKWKSVSRGMMEKGYYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSLLD 204
                    7**************9998888643366677889999**********************************************559*********9 PP

       trihelix  84 qle 86 
                     ++
  C.cajan_09909 205 TMD 207
                    997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.9E-22107232No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010629Biological Processnegative regulation of gene expression
GO:1900037Biological Processregulation of cellular response to hypoxia
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MEHNALGGGI FPNISSGLLG VENPIQQQQP NLQNQQNSHP LHHPQMVSYA TDPHQQQPQQ  60
SIKHGYNYSA TKSNKPQITL SDEDEPGFTA EDNSSGDPKR KVSPWHRMKW TDTMVRLLIM  120
AVYYIGDEAG SEGTDPTKKK ATGLLQKKGK WKSVSRGMME KGYYVSPQQC EDKFNDLNKR  180
YKRVNDILGK GTACRVVENQ SLLDTMDLSP KMKEEVRKLL NSKHLFFREM CAYHNSCGHN  240
NCGTSNVQQQ STEAQPHGDE NDVMRKRAKK VGFGVSSSSS SSLSQVMQQL SGEVSGVLQD  300
GGKSGWEKKQ WMKKRVVQLE EQQVSYQMQA FELEKQRLKW ARFSSKKERE MERDKLQNER  360
RRLEIERMVL LIRQKELELL NIQPQQQHQQ QHSST
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_09909
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0973680.0BT097368.1 Soybean clone JCVI-FLGm-21N20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020212780.10.0ESF1 homolog
TrEMBLA0A151TVB90.0A0A151TVB9_CAJCA; Uncharacterized protein
STRINGXP_007162836.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48203457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.11e-105sequence-specific DNA binding transcription factors