PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06845
Common NameKK1_007037
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 332aa    MW: 36885.9 Da    PI: 5.2594
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06845genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.2e-13132183155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
            HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  C.cajan_06845 132 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YIQRGDQASIIGGAINFVKELE 183
                    79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.28E-13130187No hitNo description
Gene3DG3DSA:4.10.280.101.0E-13130187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-15131194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.434131182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-10132183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-9137188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MALEAVVFSQ SQDPFGGYGS SVKDFYNCTL LASPNWGDYE PHINTEEEEE QGSIISTFLD  60
NSNNNNNNNN NNNPYGDWTT SSSSSMLPHL NDPQETTDPN NSHNLDTLTT TITRPKRRRA  120
KSRKNKEEIE NQRMTHIAVE RNRRKQMNEY LSVLRSLMPD SYIQRGDQAS IIGGAINFVK  180
ELEQRLHFLG AKKEGEGKSD GGGANGNMPF SEFFTFPQYS TSGGGTDNSA AKGEDVGEVQ  240
SGIADIEVTM VESHANLKIR SKKRPKQLLK LVSGLHTMRL TILHLNVTTT GEVVLYSLSV  300
KVEDDCKLGS VDDIAAAVYQ MLDRIQQEAM LN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132143RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_06845
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0934680.0BT093468.1 Soybean clone JCVI-FLGm-14K7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207714.10.0transcription factor bHLH94
SwissprotQ9C7T46e-80BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A151U4W00.0A0A151U4W0_CAJCA; Transcription factor bHLH96
STRINGXP_007144754.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-78bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]