PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_03945
Common NameKK1_004038
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 389aa    MW: 43186.8 Da    PI: 7.8866
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_03945genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.23.4e-28192250259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+++WrKYGqK  kg+++pr+YYrC +   Cpv+k+v+r+aed++++++tYeg+Hnh+
  C.cajan_03945 192 GDECQWRKYGQKIAKGNPCPRAYYRCNMGtACPVRKQVQRCAEDENIMITTYEGNHNHS 250
                    599*************************98****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.4E-31176252IPR003657WRKY domain
SuperFamilySSF1182904.32E-26185252IPR003657WRKY domain
PROSITE profilePS5081128.3186252IPR003657WRKY domain
SMARTSM007741.8E-31191251IPR003657WRKY domain
PfamPF031062.4E-24193249IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MEGKVALKKM LQVQKRAYVN TTDALNQTEE PSIKNTTLGS TLLSLSLNNL EPPQNHEQQP  60
LNKLSSLQIE IEEVKKENQN LRHMLNEITE HYAALQNQFL LVMQQKKLSS PGNNEDAKAS  120
LTYNFLFFLY IEKNIARKKP DICIFSYYVE GEINNLQGTS QEAKIIEDQA FEASCRKARV  180
SVKARAESSL MGDECQWRKY GQKIAKGNPC PRAYYRCNMG TACPVRKQVQ RCAEDENIMI  240
TTYEGNHNHS LPPPARSMAC TTSAALSMFL SGSTTTTFSN SLSTSTYYPS ASSCPTITLD  300
LTHPSSASAI SSNHFQPFPL SLHGYPQQSK GLPSKKNLDL VDVVCAAITT DPSLKAVLDS  360
AISSLIPDSH NIHNHCSQLS SSRSYYDPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-20182252877Probable WRKY transcription factor 4
2lex_A4e-20182252877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_03945
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150343e-37AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020225180.20.0WRKY transcription factor 42
TrEMBLA0A151SSM40.0A0A151SSM4_CAJCA; Putative WRKY transcription factor 42
STRINGXP_007154503.11e-173(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139451122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.19e-53WRKY family protein