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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bv4_072350_apsk.t1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family |
C2H2 |
Protein Properties |
Length: 413aa MW: 47209.7 Da PI: 7.4622 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bv4_072350_apsk.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 13.6 | 0.00019 | 250 | 269 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C ++F+r n++ H+
Bv4_072350_apsk.t1 250 FSCPLCFRTFNRYNNMQMHM 269
89*****************9 PP
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2 | zf-C2H2 | 12.7 | 0.00038 | 334 | 354 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21
+ C +Cgk+F + + ++H +
Bv4_072350_apsk.t1 334 FACRKCGKPFAVRGDWRTHEK 354
78*****************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MSDNPYFNHH HHHHHYATGF LNSSNYPSFN HFFPTTNNNN FSTLSNNNNN NNNNPYDYNF 60 FFSNTFINNN NNTSQDFNIS SKSPPSPPLR EALPLFSSSP VRNNNNNYHI NLNEDDYCNN 120 NNNSNEDQFE EFSSTTLHLG LPSCSAADLI SASLSSSSTT SDHHHMMNNN HSNNNNNNKK 180 CMNNNMMMMM MMNNEDSSRS EEVTVASSYN NNNNNNSSLI GGYCNSIGTV NKGQYWIPTP 240 AQILIGPTQF SCPLCFRTFN RYNNMQMHMW GHGSQYRKGP ESLRGTQPTA MLRLPCYCCA 300 PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG IKPFACRKCG KPFAVRGDWR THEKNSGKLW 360 YCTCGSDFKH KRSLKDHIKS FGHGHAPYGI DCFDEEDEPA SEIEQDNEIE SNQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |