PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast07G141700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | BES1 | ||||||||
Protein Properties | Length: 354aa MW: 37270 Da PI: 8.0952 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 208.1 | 2.4e-64 | 13 | 161 | 2 | 148 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasasp 90 g++r ptw+ErEnn+rRERrRRaiaakiy+GLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ +++ g+sas sp Brast07G141700.1.p 13 GGTRVPTWRERENNRRRERRRRAIAAKIYTGLRAYGNYNLPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCKPPpqARHDPLGRSASPSP 103 789***********************************************************************98888999********* PP DUF822 91 esslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148 +ss+q +sp++sy++sp+sssfps+ s+++i+l + +sl+p+l++ls+ +s Brast07G141700.1.p 104 CSSYQ--------PSPRASYNPSPASSSFPSSGSSSHITLGGNnliggvegSSLIPWLKNLSSNPS 161 *****........*************************9998899*****99*******9988444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 7.1E-70 | 13 | 157 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence Send to blast |
MTHGAGGGSG GLGGTRVPTW RERENNRRRE RRRRAIAAKI YTGLRAYGNY NLPKHCDNNE 60 VLKALCNEAG WIVEPDGTTY RKGCKPPPQA RHDPLGRSAS PSPCSSYQPS PRASYNPSPA 120 SSSFPSSGSS SHITLGGNNL IGGVEGSSLI PWLKNLSSNP SFASSSKFPQ LHHLYFNGGS 180 ISAPVTPPSS SPTHTPRIKT DWENQSVQPP WAGANYTSLP NSTPPSPGHH IAPDPAWLAG 240 FQISSAGPSS PTYNLVSHNP FGIFKEALAS TSRACSPGQS GTCSPVMGGA PTHHDVQMAD 300 GATDDFAFGS SSNGNIESPG LVKAWEGERI HEECASDELE LTLGSSMTRG DPS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-26 | 16 | 88 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-26 | 16 | 88 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-26 | 16 | 88 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-26 | 16 | 88 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast07G141700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003563774.1 | 0.0 | protein BZR1 homolog 3 | ||||
Swissprot | Q5Z9E5 | 0.0 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | I1GY36 | 0.0 | I1GY36_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G38180.1 | 0.0 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 2e-67 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Brast07G141700.1.p |
Publications ? help Back to Top | |||
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