PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Brast06G101400.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 308aa MW: 33682.6 Da PI: 4.7575 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 40.1 | 1e-12 | 129 | 217 | 4 | 98 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 r+ws +De+ +L +l ++++g+ p+ da+++ ++++++ ++ +++l +K L++++++ k+ g+ + +kehd+ ++ls Brast06G101400.1.p 129 PRIWSTDDEVRILEALAAHRQEHGVLPQP--DALMDALSGKLDNRAyGSKELQSKQTTLRQRYNNAIKR---GE--VPTKEHDRRLYDLSD 212 69**********************77766..5899******9987516889*****************9...54..5689*********** PP DUF573 94 kiWgs 98 ++Wgs Brast06G101400.1.p 213 IVWGS 217 ***95 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.3E-19 | 129 | 216 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 308 aa Download sequence Send to blast |
MAPKRGAKSS APPPPPPPPP AASSEETEDE ETAVVSPPPP TRNPPPPPPP PQNGNDSESS 60 DEEEEPARAA APKNPPPAPQ QQGKESDEES ESSESDEEAP PPEQAPKMAA EKLKPPPSSG 120 EAKKPGGIPR IWSTDDEVRI LEALAAHRQE HGVLPQPDAL MDALSGKLDN RAYGSKELQS 180 KQTTLRQRYN NAIKRGEVPT KEHDRRLYDL SDIVWGSGKA AAAKANGDEP RTFAQMCELY 240 PYLAEEVKEL EGEYPGMFKR GFEKINDDRA RAMDAKIKRQ RLVQMKVEMR RGDLAKEVCK 300 TLIELLD* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 275 | 280 | KIKRQR |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Brast06G101400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024311955.1 | 1e-143 | uncharacterized protein LOC100829980 isoform X2 | ||||
Refseq | XP_024311956.1 | 1e-143 | uncharacterized protein LOC100829980 isoform X2 | ||||
TrEMBL | A0A0Q3I5L8 | 1e-136 | A0A0Q3I5L8_BRADI; Uncharacterized protein | ||||
TrEMBL | I1IER0 | 1e-137 | I1IER0_BRADI; Uncharacterized protein | ||||
STRING | BRADI5G00487.1 | 1e-142 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6729 | 27 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61730.1 | 7e-10 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
---|---|
Phytozome | Brast06G101400.1.p |