PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast01G105300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | WRKY | ||||||||
Protein Properties | Length: 229aa MW: 25459.1 Da PI: 7.8506 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.5 | 3e-09 | 86 | 137 | 14 | 59 |
--TT-SS-EEEEEE-ST...T---EEEEEE-S...SSTTEEEEEEES--SS- CS WRKY 14 evkgsefprsYYrCtsa...gCpvkkkversa...edpkvveitYegeHnhe 59 + + + r YY+C ++ gC++kk+v++++ + ++ itY +eH+++ Brast01G105300.1.p 86 TSAKDKRIRYYYKCMYSnerGCRAKKQVQQQDsssDHRPMFLITYVNEHTCQ 137 555677889*****9988889*******986511134569**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 8.696 | 68 | 134 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-10 | 81 | 137 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 4.8E-11 | 83 | 138 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-11 | 83 | 137 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.9E-7 | 88 | 138 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MALGKDAVEQ LLQELEGGYN LNASLLELLS RPLDWRGQKM AVEMIRELSQ VLKVSLFMLK 60 AGDSSTVRES RTTPEATTYG DIGKRTSAKD KRIRYYYKCM YSNERGCRAK KQVQQQDSSS 120 DHRPMFLITY VNEHTCQQLL PKENIITTNT RTRNDHIDPP QRVGSGAELE NKIMAKCLAN 180 VIGGAAAPPS SSSTSSMPPP IEENMGEMME IYSYFLCGPP FPPASAWA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast01G105300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024314630.1 | 1e-121 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A0Q3N1A4 | 1e-129 | A0A0Q3N1A4_BRADI; Uncharacterized protein | ||||
STRING | BRADI2G53500.1 | 1e-121 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13243 | 26 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G01900.1 | 1e-06 | WRKY DNA-binding protein 62 |
Link Out ? help Back to Top | |
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Phytozome | Brast01G105300.1.p |