PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g45567.1.p
Common NameBRADI_2g45567
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 340aa    MW: 36464.8 Da    PI: 10.0851
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g45567.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_162.29.7e-20205266263
                       XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L+  + +l++ ++kl+se+
  Bradi2g45567.1.p 205 KESKRERRKQSNRESARRSRLRKQAETEELAKKVELLTAENTSLRRDIRRLTESSKKLRSEN 266
                       799*********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.5E-16160IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.4E-16199264No hitNo description
SMARTSM003385.2E-18203268IPR004827Basic-leucine zipper domain
PfamPF001701.0E-17205266IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.461206269IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.5E-10208263No hitNo description
CDDcd147024.02E-20209257No hitNo description
PROSITE patternPS000360211226IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MQAYYGPGIM PPTYFCPGLV PGHAPPPYMW SPQPLLPSAS AKPYTAVHPH GGGFSHPFMP  60
LMVNPLSVEP AKSVNSDENN QNKKLKEVDG TAVSTGSGHS EKTSWDCSVG GSSDGNIQKA  120
SGTPKKRRLH GTPIADGKKA LHYSAALETG GTTTGNDVPG EQGRPTNLPS LYIPDRAIKP  180
NASTASDFSV IGTPISTEFP DQDRKESKRE RRKQSNRESA RRSRLRKQAE TEELAKKVEL  240
LTAENTSLRR DIRRLTESSK KLRSENSALM ATLTEAAPDQ TPEASADQTA EQSARAAKNF  300
MPVMDSTSAS RNSGHMAHGV PKLRQLLGSR LASDAVAAR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220226RRSRLRK
2220227RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g45567.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232100.10.0G-box-binding factor 3 isoform X2
TrEMBLA0A0Q3MXI90.0A0A0Q3MXI9_BRADI; Uncharacterized protein
STRINGBRADI2G45567.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Representative plantOGRP43461123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-46G-box binding factor 3