PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g21380.1.p
Common NameBRADI_2g21380
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 311aa    MW: 34039.7 Da    PI: 9.5995
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g21380.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.92.2e-082562744
                      HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                       rr+++NR AAr+sR+RKka++++Le  + +L +  ++
  Bradi2g21380.1.p 25 LRRLAQNRDAARKSRLRKKAYVQKLESSSLKLAQLEQE 62
                      59************************977766655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.00761978IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-62565No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-82667No hitNo description
PROSITE patternPS0003602641IPR004827Basic-leucine zipper domain
PfamPF141441.1E-27105181IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MDYASPGGTD TSTDPGIAKK NQMTLRRLAQ NRDAARKSRL RKKAYVQKLE SSSLKLAQLE  60
QELLRARQQG YVTSTLGEQP HPANGNGALA LDVEYGRWLE EHNKQIDELR AAISARATDG  120
DLHAIVENIM AHVDEIFRLK SVATKANAFH VLAGAWTTPV ERCFLWLSGF RPSELPKLLA  180
SQLEPLTEKQ LASICSLRQS SQQAEDTLSR DMEVLLQSAA EIVASGTSPT WYPAGSSGDT  240
GQMSAAIGKL GAVESLLQQA DELRLRILRD VQRILTTRQS ARALLAISGY FSRLRALSSL  300
WIARPSTGMN *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g21380.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024315514.10.0transcription factor TGAL1
RefseqXP_024315515.10.0transcription factor TGAL1
SwissprotQ6IVC21e-135TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLI1HI580.0I1HI58_BRADI; Uncharacterized protein
STRINGBRADI2G21380.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2086457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-109bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]