PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g64550.1.p
Common NameBRADI_1g64550, LOC100827640
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 183aa    MW: 20918.9 Da    PI: 9.7444
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g64550.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.55.8e-081979363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                      e +r  r+ +NR++A+rsR +++++ e L+  +  L+ eN+a++  +   ++++  l++e+
  Bradi1g64550.1.p 19 EERRRNRMTSNRLSAQRSRMKRQQREEDLAAQASRLKLENEAMRAAAGIRQQQCRLLQQEN 79
                      567889**************************************99988888888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-81777No hitNo description
SMARTSM003388.2E-101781IPR004827Basic-leucine zipper domain
PfamPF077166.1E-51878IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.681962IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-72176No hitNo description
CDDcd147023.99E-112263No hitNo description
PROSITE patternPS0003602539IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MVPRQRPALA PRRRAITEEE RRRNRMTSNR LSAQRSRMKR QQREEDLAAQ ASRLKLENEA  60
MRAAAGIRQQ QCRLLQQENR VRAAHARELY AVLQLRNSQL RMLGQAADLP LDVPEVSAHL  120
TQLYGGGPPA VPPLPPEIYQ MLQFQPPLER QIDQMLFQPP LSPEIDQTLF QPPDDVMDDE  180
AS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439RSRMKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g64550.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228714.11e-125bZIP transcription factor 53
TrEMBLI1H6891e-124I1H689_BRADI; Uncharacterized protein
STRINGBRADI1G64550.11e-125(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125042837
Representative plantOGRP1197246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.12e-08G-box binding factor 6