PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bradi1g64550.1.p | ||||||||
Common Name | BRADI_1g64550, LOC100827640 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 183aa MW: 20918.9 Da PI: 9.7444 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.5 | 5.8e-08 | 19 | 79 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e +r r+ +NR++A+rsR +++++ e L+ + L+ eN+a++ + ++++ l++e+ Bradi1g64550.1.p 19 EERRRNRMTSNRLSAQRSRMKRQQREEDLAAQASRLKLENEAMRAAAGIRQQQCRLLQQEN 79 567889**************************************99988888888888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-8 | 17 | 77 | No hit | No description |
SMART | SM00338 | 8.2E-10 | 17 | 81 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 6.1E-5 | 18 | 78 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.68 | 19 | 62 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-7 | 21 | 76 | No hit | No description |
CDD | cd14702 | 3.99E-11 | 22 | 63 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 25 | 39 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MVPRQRPALA PRRRAITEEE RRRNRMTSNR LSAQRSRMKR QQREEDLAAQ ASRLKLENEA 60 MRAAAGIRQQ QCRLLQQENR VRAAHARELY AVLQLRNSQL RMLGQAADLP LDVPEVSAHL 120 TQLYGGGPPA VPPLPPEIYQ MLQFQPPLER QIDQMLFQPP LSPEIDQTLF QPPDDVMDDE 180 AS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 39 | RSRMKR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Bradi1g64550.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010228714.1 | 1e-125 | bZIP transcription factor 53 | ||||
TrEMBL | I1H689 | 1e-124 | I1H689_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G64550.1 | 1e-125 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12504 | 28 | 37 | Representative plant | OGRP11972 | 4 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34590.1 | 2e-08 | G-box binding factor 6 |
Link Out ? help Back to Top | |
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Phytozome | Bradi1g64550.1.p |
Entrez Gene | 100827640 |