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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Bostr.26527s0101.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
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Family |
EIL |
Protein Properties |
Length: 523aa MW: 59352.1 Da PI: 6.6244 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Bostr.26527s0101.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 390.2 | 2.9e-119 | 48 | 410 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasd 89
eel+k+ w+d+++lkrlke+ k ++++ ++ ++ +++++++m +aQDgiLkYM k+me ++aqGfvYgi+ e+gk+v+g+sd
Bostr.26527s0101.1.p 48 EELEKKIWRDKQRLKRLKEMAKIGIGKRLL---KQHDDDFPQHSSKRTMYKAQDGILKYMSKTMERYKAQGFVYGIVLENGKTVTGSSD 133
8*********************99866655...777889************************************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S-- CS
EIN3 90 sLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGke 178
+Lr+WWk+kv+fdrngpaai+k+q + + ++g++ + + + h+l elqDTtlg+LLsalm hc+ppqrrfpl+kgv+pPWWPtGke
Bostr.26527s0101.1.p 134 NLREWWKDKVRFDRNGPAAIMKHQREINPSDGSDLGSEVGDCTAHKLLELQDTTLGALLSALMPHCKPPQRRFPLDKGVTPPWWPTGKE 222
***********************9888887777777777999*********************************************** PP
HHHHHHT--TT--...-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.. CS
EIN3 179 lwwgelglskdqg..tppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.. 263
+ww++l+l++d + +ppykkphdlkk wkv+vL vi+hm+ +i++i +l+r+s++lq+km+++e + +l+ ln+e++ +++++
Bostr.26527s0101.1.p 223 DWWDQLSLPEDCRglPPPYKKPHDLKKLWKVGVLIGVIRHMASDISNIPNLVRRSRSLQEKMTSREGALWLAALNREKAVVDQIHNPft 311
*************************************************************************************9966 PP
.XX.........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXX CS
EIN3 264 .ss.........slrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgseteli 342
s+ +++++v + +++++dveg s+ + q + ++f+ v krk + + +++ + tc++s +++s+++++
Bostr.26527s0101.1.p 312 fSRennntcnflVPGTSDTDVLFPESANYDVEGIGGSHPFNPQYPDVDNNFNSVYKRKFEGDLGISMHPT--LLTCENSLCPYSQPQMG 398
533667777654333489999999999*****88888888999999999********9766666666555..89*************** PP
XXXXXXXXXXXX CS
EIN3 343 fadknsisqney 354
f+d++ ++++++
Bostr.26527s0101.1.p 399 FHDRTLRENHQM 410
**********96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 523 aa
Download sequence Send
to blast |
MDMYSNNRGL FRGLVCSPVP PFTEGDVCSD SHNALCDDLS SDEEMEIEEL EKKIWRDKQR 60 LKRLKEMAKI GIGKRLLKQH DDDFPQHSSK RTMYKAQDGI LKYMSKTMER YKAQGFVYGI 120 VLENGKTVTG SSDNLREWWK DKVRFDRNGP AAIMKHQREI NPSDGSDLGS EVGDCTAHKL 180 LELQDTTLGA LLSALMPHCK PPQRRFPLDK GVTPPWWPTG KEDWWDQLSL PEDCRGLPPP 240 YKKPHDLKKL WKVGVLIGVI RHMASDISNI PNLVRRSRSL QEKMTSREGA LWLAALNREK 300 AVVDQIHNPF TFSRENNNTC NFLVPGTSDT DVLFPESANY DVEGIGGSHP FNPQYPDVDN 360 NFNSVYKRKF EGDLGISMHP TLLTCENSLC PYSQPQMGFH DRTLRENHQM TCPYKVTSFY 420 QPTKPYGMPG LMVPCPDYNR MQQQVQSIQD NFNPPNNIYR PKAEQRGGNN DGLLEDLSPS 480 PLMLNHNPGL VLPTDFNGDA EQVGMENNLQ NQGQGLPTSW IQ*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC069325 | 0.0 | AC069325.6 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome V, complete sequence. |
GenBank | AC140977 | 0.0 | AC140977.1 Arabidopsis thaliana chromosome 5 BAC F13M11 genomic sequence, complete sequence. |
GenBank | AF004214 | 0.0 | AF004214.1 Arabidopsis thaliana ethylene-insensitive3-like2 (EIL2) mRNA, complete cds. |
GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |