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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
BGIOSGA034522-PA |
| Common Name | OsI_35054 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family |
GRAS |
| Protein Properties |
Length: 463aa MW: 52706.6 Da PI: 7.2052 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| BGIOSGA034522-PA | genome | RIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 272 | 1.8e-83 | 20 | 439 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkf 93
v lL ecA +v++g++e+a+ ++++ l ++ p+q l + ++ L +rl++s ++ly al +ps+ + s+ aa++ f+++ P+l
BGIOSGA034522-PA 20 VPLLHECASHVTEGSFEKADFSFKKIRMLT-IADGPLQHLSKIIVDSLDHRLLSSIQGLYGALiNPSDYF--EKSTLRAARHNFFKLNPYLST 109
6789**********************9876.5667*************************9995555554..35555567788********** PP
GRAS 94 shltaNqaIleavege....ervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+++t N+aI+ea+e e + vHi+D++ s ++ QW+ Ll+ + Rp+g+p+l +T++++ +++ l e+++ L+k Ae+lgv+f+f
BGIOSGA034522-PA 110 GFVTINRAIMEAMEDEkvelQVVHIVDLSCSaaHPWQWLKLLDDFHGRPGGAPELYLTVLHD----DNDFLAEMQSLLSKKAESLGVSFHFIS 198
****************9998999*****8653389***************************....9************************** PP
GRAS 181 lvakrledleleeLrvkp....gEalaVnlvlqlhrll.........................................desvsleserdevL 228
v rle+l++++Lr g a+a++++lq+hrll s +++ ++L
BGIOSGA034522-PA 199 -VIGRLETLDFSNLRSTFqikfGVAVAISCALQMHRLLlvddnlsstsiaqlqkmanftqpkqmassvcspastlnylqTPSPRTPKLLARLL 290
.799**********54444555*******************************************************98666777778899** PP
GRAS 229 klvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetlekWrer 318
++++ l+P+++ ++eq+adhn+ F +rf e l+yy+alfd+++a ++++ +er vEr++l++ei+n++ ceg +r +rhe+l +W +
BGIOSGA034522-PA 291 SAIQALKPNIMLIMEQDADHNTLLFRDRFNEVLNYYAALFDCFHAVAAANPgrtDERLRVERMILREEIKNILVCEGVHRHKRHERLDQWAMH 383
*******************************************77654444456*************************************** PP
GRAS 319 leeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ee+GF++v+ls +a + k l ++ + + +e++g+l+l+W +L+s+SaWr
BGIOSGA034522-PA 384 MEESGFHNVQLSFSAIREGKENLLSFGLKNCQNKEDRGCLLLCWGYTNLYSISAWR 439
***************************888*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MMHGLWVQDQ GMVDHLAQLV PLLHECASHV TEGSFEKADF SFKKIRMLTI ADGPLQHLSK 60
IIVDSLDHRL LSSIQGLYGA LINPSDYFEK STLRAARHNF FKLNPYLSTG FVTINRAIME 120
AMEDEKVELQ VVHIVDLSCS AAHPWQWLKL LDDFHGRPGG APELYLTVLH DDNDFLAEMQ 180
SLLSKKAESL GVSFHFISVI GRLETLDFSN LRSTFQIKFG VAVAISCALQ MHRLLLVDDN 240
LSSTSIAQLQ KMANFTQPKQ MASSVCSPAS TLNYLQTPSP RTPKLLARLL SAIQALKPNI 300
MLIMEQDADH NTLLFRDRFN EVLNYYAALF DCFHAVAAAN PGRTDERLRV ERMILREEIK 360
NILVCEGVHR HKRHERLDQW AMHMEESGFH NVQLSFSAIR EGKENLLSFG LKNCQNKEDR 420
GCLLLCWGYT NLYSISAWRQ NRGSSSGSRE HMLVQRQIIW PFQ
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK242794 | 0.0 | AK242794.1 Oryza sativa Japonica Group cDNA, clone: J090058A05, full insert sequence. |
