PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Y7LV8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 362aa    MW: 40345.8 Da    PI: 8.1695
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Y7LV8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.96.4e-26179241259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE....EEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk....versaedpkvveitYegeHnhe 59 
                   Dg++WrKYGqK+ kg+++pr+YYrC++  +Cpv+k+    v+r+a d++vv++tYeg+Hnh+
  Araip.Y7LV8 179 VDGCQWRKYGQKTSKGNPCPRAYYRCSMGqTCPVRKQvhphVQRCAMDERVVITTYEGNHNHP 241
                  59**************************889*****7333369*******************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-29163243IPR003657WRKY domain
SuperFamilySSF1182909.94E-23172243IPR003657WRKY domain
PROSITE profilePS5081126.234173243IPR003657WRKY domain
SMARTSM007741.1E-28178242IPR003657WRKY domain
PfamPF031066.3E-23180241IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MEGKIALKNL LQVQEFALNS THDSSSVSNN TLGSTLLSLS LNPQQNQDQS HTQLEVLKKK  60
LEEVKKENQN LRIMLNQIRE HYGVLQNQLL LAMQCHQLSS SSPTIINHDL KNDNREEMLE  120
RKMLPTTRKF GFDVKNEMSK HIASQEAKIL EDQLPSFEAS CNKKARVSIR ARSNFSMMVD  180
GCQWRKYGQK TSKGNPCPRA YYRCSMGQTC PVRKQVHPHV QRCAMDERVV ITTYEGNHNH  240
PLPEAARSIA TTTTSALNMF LCGSMTTTTT SSTSLSLSST SSSCPTLTLD LTTQQPSNDI  300
IASQQPLLFP LPLNASYTQE NNLALVDLVT AALTNDPSLK EALLAAFSSL THNNNTIINE  360
HV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-21165243174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Y7LV8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1434645e-42BT143464.1 Lotus japonicus clone JCVI-FLLj-21J12 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177306.10.0probable WRKY transcription factor 47
TrEMBLA0A445AYJ50.0A0A445AYJ5_ARAHY; Uncharacterized protein
STRINGGLYMA13G17800.11e-108(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139451122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-42WRKY family protein