PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.XT8EM

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

HD-ZIP

Protein Properties

Length: 289aa MW: 32424 Da PI: 7.0267

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.XT8EM	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.9	4e-19	103	153	6	56
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ eq+++Le+ Fe ++++ e++ +LAk lgL+ rq+ +WFqNrRa++k Araip.XT8EM 103 RLGMEQVKALEKSFEAGNKLDPERKMQLAKALGLQPRQIAIWFQNRRARWK 153 56789*********************************************9 PP
2	HD-ZIP_I/II	130.9	5.1e-42	99	191	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl eqvk+LE+sFe+ +kL+perK++la++Lglqprq+a+WFqnrRAR+ktkqlEk+ye+Lk+++da+k++n++L++++++L++el++ Araip.XT8EM 99 EKKKRLGMEQVKALEKSFEAGNKLDPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEVLKKQFDAVKADNDSLKTQNQKLHAELEA 191 69***************************************************************************************9976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.54E-19	92	157	IPR009057	Homeodomain-like
PROSITE profile	PS50071	16.957	95	155	IPR001356	Homeobox domain
SMART	SM00389	2.5E-19	98	159	IPR001356	Homeobox domain
CDD	cd00086	2.90E-17	100	156	No hit	No description
Pfam	PF00046	2.3E-16	102	153	IPR001356	Homeobox domain
Gene3D	G3DSA:1.10.10.60	4.2E-20	107	154	IPR009057	Homeodomain-like
PRINTS	PR00031	1.0E-5	126	135	IPR000047	Helix-turn-helix motif
PROSITE pattern	PS00027	0	130	153	IPR017970	Homeobox, conserved site
PRINTS	PR00031	1.0E-5	135	151	IPR000047	Helix-turn-helix motif
Pfam	PF02183	3.2E-15	155	194	IPR003106	Leucine zipper, homeobox-associated

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence Send to blast
MAFPPSHSFI FHHDHQQPQH HPLRTTPPSA PAFPSFPPHH HHFPAGGGGG SGGGSWMKRS 60 MSFSGIDTTK NCGGGAGADE LALLHGDDEL SDDGSQIGEK KKRLGMEQVK ALEKSFEAGN 120 KLDPERKMQL AKALGLQPRQ IAIWFQNRRA RWKTKQLEKE YEVLKKQFDA VKADNDSLKT 180 QNQKLHAELE ALKGSREWCE NGTMITLKKE NEGSWSNNGS DNSSDMNLDL SRTPVMNSPP 240 ASITQLLQCS SSSRSDLQDE GFCNMFHNID EQHQNFWPWP TTENHHHFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	155	RRARWKTKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.XT8EM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025683322.1	0.0	homeobox-leucine zipper protein HAT7 isoform X1
Swissprot	Q00466	2e-75	HAT7_ARATH; Homeobox-leucine zipper protein HAT7
TrEMBL	A0A444X818	0.0	A0A444X818_ARAHY; Uncharacterized protein
STRING	XP_007151217.1	1e-118	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1271	33	106

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	4e-59	homeobox 3