PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.XLI8D | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ARR-B | ||||||||
Protein Properties | Length: 534aa MW: 60439.5 Da PI: 5.5133 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77.7 | 1.5e-24 | 206 | 259 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl Araip.XLI8D 206 KARVVWSVDLHQKFVQAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 259 68*******************.9*******************************8 PP | |||||||
2 | Response_reg | 81.2 | 3.3e-27 | 21 | 129 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++l+k y +v+++ ++eal++l+e++ +D+++ D++mp+m+G++ll++ e +lp+i+++ ge + + + ++ Ga Araip.XLI8D 21 VLVVDDDPTWLKILEKMLKKCSY-QVTTCCLATEALKKLRERKdaFDIVISDVNMPDMNGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 115 89*********************.***************888889**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ Araip.XLI8D 116 DYLLKPIRMKELRN 129 ***********987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF036392 | 4.4E-144 | 2 | 501 | IPR017053 | Response regulator B-type, plant |
SuperFamily | SSF52172 | 6.83E-36 | 18 | 143 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 3.2E-44 | 18 | 142 | No hit | No description |
SMART | SM00448 | 2.3E-31 | 19 | 131 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 43.631 | 20 | 135 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 1.4E-24 | 21 | 130 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 1.97E-29 | 22 | 135 | No hit | No description |
SuperFamily | SSF46689 | 1.97E-17 | 204 | 263 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.7E-28 | 204 | 264 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.8E-22 | 206 | 259 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.3E-7 | 208 | 258 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 534 aa Download sequence Send to blast |
MDNNGCLPCT RREGFPAGLR VLVVDDDPTW LKILEKMLKK CSYQVTTCCL ATEALKKLRE 60 RKDAFDIVIS DVNMPDMNGF KLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK 120 PIRMKELRNI WQHVLRKRIH EGREFESLEG FDFEGIHHLM RNGQDQCCDD VSLFALEDCI 180 SSTRKRKDAD NKHDEREFGD SSSTKKARVV WSVDLHQKFV QAVNQIGFDK VGPKKILDLM 240 NVPWLTRENV ASHLQKYRLY LSRLQKQRDQ KKCSSSGIKN PDLNPKDPGS SSIKNSMNKQ 300 QNVVSIDGFR CPNNGLVQLH ESDFTVSELN KTEQRRALAT NNIIPDPNMT KVSQIVLNQT 360 FSPLNSEGNI EVFDCTIPTQ YTWNQVPKRK LQDDPKSQSI ASMVSSPSAA SSIASSAVDN 420 IIPVQSKSLM VNDQSSVTSN PGLKTQEFDA SLIPELEFYQ QNLLWGGEAA FSPLEEDLNF 480 FLLQSECYND MNFGMHNIDT SDYYYDPGLI ADVPNHLLYD SADYSVVDQS LFIA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 1e-17 | 202 | 264 | 1 | 63 | ARR10-B |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.XLI8D |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016191131.1 | 0.0 | two-component response regulator ARR11 | ||||
Refseq | XP_020975658.1 | 0.0 | two-component response regulator ARR11 | ||||
Refseq | XP_025640057.1 | 0.0 | two-component response regulator ARR11 | ||||
TrEMBL | A0A445DLL3 | 0.0 | A0A445DLL3_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA05G27670.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3999 | 33 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-121 | response regulator 11 |