PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.X9TAK | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 469aa MW: 51759.2 Da PI: 8.0226 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.8 | 3.1e-30 | 192 | 251 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+aed +++++tYeg+Hnh+ Araip.X9TAK 192 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCAEDLSILITTYEGTHNHP 251 58***************************99****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.0E-31 | 178 | 253 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-27 | 185 | 253 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.369 | 187 | 253 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.8E-36 | 192 | 252 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.7E-27 | 193 | 251 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006952 | Biological Process | defense response | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 469 aa Download sequence Send to blast |
GYYVKLEERS TTRDITIMEE KRVSSISFED SVTKGEVKEE NGRLKMITER VEENYHSLQL 60 QFFDILTKKA FKEVVSDSAT NTIGDETEEE HELVSLCLGR NPSKHNKDVA RIGNNSKNKV 120 NKENEEFEKP CLTLGLDSKC VLPKESAEET LSSITQKHQV KVKNSSNDGS SDQMPAKRAR 180 VSVRARCDSP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV APACPVRKQV QRCAEDLSIL 240 ITTYEGTHNH PLPFSASAIA STTSAAASML ISGSSESHNS SFFKNVSTLH TGVCLGQQFD 300 QSRATKNVFL PNNNVTLDLT SSASNTLLPS NTSSANLFTM PIPFVEKTHI IRPVMLRNSS 360 SWGKHFYEEC MRNRTLHPPK DAFLAETITK AMKTDPSLHS VIAAAVSSIV GQQGYSASCN 420 NQEGSEILIP STQLGSSIPF NQSNKGYIEI EGYFKRLLSS SSGAGDMLP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-21 | 179 | 253 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.X9TAK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT146231 | 8e-57 | BT146231.1 Lotus japonicus clone JCVI-FLLj-21B16 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016194248.1 | 0.0 | probable WRKY transcription factor 72 | ||||
Refseq | XP_025649896.1 | 0.0 | probable WRKY transcription factor 72 | ||||
TrEMBL | A0A444ZQ28 | 0.0 | A0A444ZQ28_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA09G37470.1 | 1e-125 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF650 | 34 | 134 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 1e-55 | WRKY DNA-binding protein 72 |