PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.WT200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | BES1 | ||||||||
Protein Properties | Length: 263aa MW: 27631.5 Da PI: 5.9234 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 36.2 | 2.1e-11 | 6 | 81 | 71 | 150 |
DUF822 71 kgskpleeaeaagssas.aspesslqsslkssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsssl 150 +g+kple+++++g s++ asp+ss++ +sp++sy++sp sssfpsps++ +s++ + +sl+p+l++ls++sss+ Araip.WT200 6 QGCKPLERMDIIGGSSTaASPCSSYH--------PSPCASYNPSPGSSSFPSPSRSPYASNNPNgdgNSLIPWLKNLSTASSSA 81 69********998877659******9........*********************988776655788**********9988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.1E-11 | 6 | 75 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence Send to blast |
MVLQYQGCKP LERMDIIGGS STAASPCSSY HPSPCASYNP SPGSSSFPSP SRSPYASNNP 60 NGDGNSLIPW LKNLSTASSS ASSPKLPHLY LQSGSISAPV TPPLSSPTAR TPRMNADWGD 120 QSGRPGPGWT GGQHYSFLPS SSPPSPGRQV VDPEWFAGIK LPHVSPTSPT FTLMSSNPFA 180 FKEEGLARSG SRMWTPGQSG TCSPAFPAGS DHTADIPMSE AVSDEFAFGG DASGLVKPWE 240 GERIHEEFGA DDLELTLGTS KTR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.WT200 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016171887.1 | 0.0 | BES1/BZR1 homolog protein 4 | ||||
Refseq | XP_025672690.1 | 0.0 | BES1/BZR1 homolog protein 4 | ||||
Swissprot | Q9ZV88 | 6e-96 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A445CI19 | 0.0 | A0A445CI19_ARAHY; Uncharacterized protein | ||||
STRING | XP_007149549.1 | 1e-129 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2661 | 33 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 5e-80 | BES1/BZR1 homolog 4 |