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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Araip.RWP2N |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family |
GRAS |
Protein Properties |
Length: 459aa MW: 51788.6 Da PI: 7.0385 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Araip.RWP2N | genome | NCGR_PGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 270.7 | 4.8e-83 | 40 | 457 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
l+ +cA+ ++ g+ + a++ La++s+las++gdp+qRla+yf eAL +l++ s + ++ + +++ s + e ++ lf+e+ P+ ++s+ ++Nq
Araip.RWP2N 40 LVRNCAKYIECGNISDADSGLAKISHLASSEGDPFQRLATYFSEALTCQLVNrSYLHGAHHILSKPLS---TFEDSFVKGLFFELYPFQRVSYAVTNQ 134
6679********************************************99994444444445445444...7888899999***************** PP
GRAS 101 aIleavegeervHiiDfdisq.GlQWpaLlqaLasRpeg..........ppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
aI ea+ g + +Hi+D+++ + +QW+ ++q+L +R ++ p l+iT v+ ++e l +++ rL+ A+++ +++ +++le
Araip.RWP2N 135 AIIEAMTGLQGIHILDLSAPHdATQWVLFMQSLKERCSSssssstrpqqRPYLKITCVHT----NQEVLAQIKLRLTLEADKF-----IQL--VSTLE 221
******************965489*********99983334555565559**********....99***************85.....343..699** PP
GRAS 188 dleleeLrvkpgEalaVnlvlqlhrll........................................................desvsleserdevLk 229
+l+l++L + +gE +a+++vlqlhrll +++v+ + + +L+
Araip.RWP2N 222 NLNLDDLPILNGEPVAISIVLQLHRLLstddppvpavvsnqffhqqnfadviakdsynnnnhnviinqspnsalalathhrltQSPVP---KMECFLH 316
****************************************************************************987653322222...5679*** PP
GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327
+++l+Pkv+v++eqe++ n++s+ +r+ +al++y+alfd+l + s ++i vEr++lg++i+n++acegaer+er e+l+ W +rle aGF
Araip.RWP2N 317 GLWKLQPKVMVIMEQESNVNGQSLTDRVDKALYFYAALFDCLVTA---PSVKKILVERAMLGEQIKNIIACEGAERKERYESLKAWISRLELAGFCGE 411
******************************************777...699*********************************************** PP
GRAS 328 plsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++s + + + l++++ +gy++ +++ l+l+W+++pL+s+SaWr
Araip.RWP2N 412 AISLEGMLRGLTELQNFA-RGYKIIRDEKFLFLCWNNNPLFSLSAWR 457
*****************9.***************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MWHTCINVFD MIIALLGSAH GYPWFKGISS EPRGMLLYTL VRNCAKYIEC GNISDADSGL 60 AKISHLASSE GDPFQRLATY FSEALTCQLV NRSYLHGAHH ILSKPLSTFE DSFVKGLFFE 120 LYPFQRVSYA VTNQAIIEAM TGLQGIHILD LSAPHDATQW VLFMQSLKER CSSSSSSSTR 180 PQQRPYLKIT CVHTNQEVLA QIKLRLTLEA DKFIQLVSTL ENLNLDDLPI LNGEPVAISI 240 VLQLHRLLST DDPPVPAVVS NQFFHQQNFA DVIAKDSYNN NNHNVIINQS PNSALALATH 300 HRLTQSPVPK MECFLHGLWK LQPKVMVIME QESNVNGQSL TDRVDKALYF YAALFDCLVT 360 APSVKKILVE RAMLGEQIKN IIACEGAERK ERYESLKAWI SRLELAGFCG EAISLEGMLR 420 GLTELQNFAR GYKIIRDEKF LFLCWNNNPL FSLSAWRYL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5b3g_A | 5e-26 | 43 | 456 | 25 | 378 | Protein SCARECROW |
5b3h_A | 5e-26 | 43 | 456 | 24 | 377 | Protein SCARECROW |
5b3h_D | 5e-26 | 43 | 456 | 24 | 377 | Protein SCARECROW |