PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Q0SV8
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 178aa    MW: 20909.3 Da    PI: 4.8502
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Q0SV8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.21.9e-11113178166
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkakl 66 
                  +fYn+YA    F +rk+   +  ++g+i++r++ C+keg r+ +  + ++++r+ r+ tr++C a+l
  Araip.Q0SV8 113 QFYNAYACWHDFVMRKDDVVRD-KEGKIICRQLICNKEGCRNMRYLDlDNRSREARSLTRIKCPARL 178
                  6*****************9998.6677****************99887889999**********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.3E-9113178IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
LTSAHHETVT SGRRFTIPIF QSASNHVRLK LWLSSRGIIM STYEDDIKND SDNDLGDDFD  60
YEPNAHYDVE DDDVDSLDFT SKSEHDCDVK RIANLMVEDI WNLQFRTEDE ACQFYNAYAC  120
WHDFVMRKDD VVRDKEGKII CRQLICNKEG CRNMRYLDLD NRSREARSLT RIKCPARL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Q0SV8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016168287.17e-99protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YKX61e-76A0A444YKX6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-09FAR1 family protein