PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P4X0Y
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 195aa    MW: 22559.1 Da    PI: 4.6283
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P4X0YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.82.4e-2099190191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+Y+    F +rk+   +  ++g+i+ r++vC+keg r+ +  + ++++r+ r+ trt+C a+l+vk+++  g+w+v+ +++ HnH+l+p
  Araip.P4X0Y  99 QFYNAYSCWHRFVMRKDDVVRD-NQGRIIIRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRVKLDYgCGRWKVSCFVESHNHDLTP 190
                  6****************99998.8888***************9998867889999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.7E-1899190IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
CVGLGKGHLP PTPTVHFLSV EAQPLVVIKE DDVKNDSDND LGDDFDYQPN AEDDADDDDV  60
DSLDSTSKSE EVCGVKRIAD LMVEDIWNLE FRTEDEACQF YNAYSCWHRF VMRKDDVVRD  120
NQGRIIIRQL VCNKEGWRNM RYLDMDDRSR EARSLTRTKC PARLRVKLDY GCGRWKVSCF  180
VESHNHDLTP PQFAH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P4X0Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953982.11e-117protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YPV11e-115A0A444YPV1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-18FAR1-related sequence 5