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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Araip.NI7GI | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 295aa MW: 33559.5 Da PI: 6.7654 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 27.9 | 7.5e-09 | 85 | 125 | 51 | 90 |
FAR1 51 errtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
+r++++e+ +gC+a+++v+ ++ +g+w ++ +++ HnH++
Araip.NI7GI 85 RREPKPESICGCEAEMRVHVHRkSGRWIIIYFQEVHNHKML 125
6889999************9998***************985 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF03101 | 6.4E-6 | 85 | 125 | IPR004330 | FAR1 DNA binding domain |
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 295 aa Download sequence Send to blast |
MDGRVNVSAG VNKYCARVSS LEEDPDRYCN NSMYAPFQEE GVVEENATSE GDDFEWVGGH 60 SAESDREVPF AFYNLYAKMN GFATRREPKP ESICGCEAEM RVHVHRKSGR WIIIYFQEVH 120 NHKMLEDTLT FMLPGHKMMN AAFINQTNMM FKWVCDLYAK RAMWATTYIC RHFSGGFRTT 180 SRCEGLHSML GKDLVMQISL HALERLAANL LTWKIFLLFK PMLSRACTLK VRSCTYTPME 240 LCVPVSNDAD EFVEVTQKLR NEISCIKGSV KEVGERPNVV GSSTLEGCVR DPNIA |
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Araip.NI7GI |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| TrEMBL | A0A445BW27 | 1e-106 | A0A445BW27_ARAHY; Uncharacterized protein | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF3613 | 6 | 39 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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