PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.MZJ7P | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 211aa MW: 24460 Da PI: 8.4733 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.4 | 1.8e-26 | 44 | 134 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYA++ GF vr++k ++s+ +++i++r+++C+keg++ + k++ + r++r++ r gC+a+++vk +k gkw+vtk+++eH+H+l+ Araip.MZJ7P 44 NFYDEYARQEGFIVRIDKCHRSEIDNRIISRRLTCNKEGFHVRGKNDkVNPYRKPRVSIREGCEAMMMVKVNKCGKWVVTKFVKEHSHPLM 134 6***************************************98877774678899***********************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.7E-25 | 44 | 134 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MELEAELVTA NESSAEKTVG PCVGASILEP YIGMEFDSEA DAKNFYDEYA RQEGFIVRID 60 KCHRSEIDNR IISRRLTCNK EGFHVRGKND KVNPYRKPRV SIREGCEAMM MVKVNKCGKW 120 VVTKFVKEHS HPLMGSGVRS YRTTESKDKR IRQLTKELER RDQQCQQYRK LILSLLETVE 180 EQNKFLSTKV EHVVQCVKQL ENDVQKPLDT S |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.MZJ7P |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016177382.1 | 1e-157 | protein FAR1-RELATED SEQUENCE 5 isoform X1 | ||||
Refseq | XP_025679343.1 | 1e-157 | protein FAR1-RELATED SEQUENCE 5 isoform X1 | ||||
TrEMBL | A0A444XDR6 | 1e-156 | A0A444XDR6_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA03G22670.2 | 3e-89 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF965 | 31 | 104 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 2e-51 | FAR1 family protein |