PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.M3RAJ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 364aa    MW: 40840.7 Da    PI: 10.0924
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.M3RAJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.44e-1491141155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  Araip.M3RAJ  91 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 141
                  89********.7******5553..2.26**********99**********99776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.5E-1091141IPR001471AP2/ERF domain
CDDcd000184.69E-2691151No hitNo description
SuperFamilySSF541713.6E-1791151IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.4E-1692149IPR001471AP2/ERF domain
PROSITE profilePS5103215.46192149IPR001471AP2/ERF domain
SMARTSM003804.2E-3192155IPR001471AP2/ERF domain
PRINTSPR003672.7E-693104IPR001471AP2/ERF domain
PRINTSPR003672.7E-6131151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MDSENHSQVV TRQREILPIR NTWCWKIITG SFSTHEKKSP RTAVKKLTVQ RSHFLQKNRS  60
MGVSYLMSNL TKEEFVHVLR RQSTGFPRGS SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG  120
LFDTEIEAAR AYDKAAIKCN GKEAVTNFDP SIYENELNSV EPTGNAADHN LDLSLGNSSF  180
KSSNNSRALG NHTTNVQDHP QQLMPSESNW RNGASKPKLV NILPKPCNRN MEAHGGRDLH  240
GESEALRMLS QTHIHSTTCS ASNETQRYGP YRSPGEPQML HNFAHLQPPN FYFSSSSSNG  300
GRIGNDLSLS MADHHQQQLQ PGPPHHYLAT AAASSGFPPQ ISRPSSHHQG WLQKNGFHTI  360
MRPS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.M3RAJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT1631211e-109KT163121.1 Thermopsis turcica APETALA2-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025627261.10.0floral homeotic protein APETALA 2 isoform X1
TrEMBLA0A445AQG30.0A0A445AQG3_ARAHY; Uncharacterized protein
STRINGXP_007155905.11e-160(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37843463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.21e-65AP2 family protein