PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.GQ95T
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 394aa    MW: 44861.5 Da    PI: 7.8203
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.GQ95TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.41.8e-195599348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rW++eEd ll++ vk++  ++Wk+Ia++++ gRt+ qc +rwqk+l
      Araip.GQ95T 55 RWSEEEDNLLIQIVKKHEARNWKKIAAYLP-GRTEVQCLHRWQKVL 99
                     9*****************************.************986 PP
2Myb_DNA-binding53.45.8e-17105151148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT+eEd++l ++v+++G ++W+  a+ ++ gR +kqc++rw++ l
      Araip.GQ95T 105 KGYWTKEEDDRLTELVRKYGLKRWAELAKFLP-GRIGKQCRERWHNNL 151
                      689*****************************.************975 PP
3Myb_DNA-binding54.72.4e-17157200146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +++WT+eE++ l+++++ +G++ W+ Iar+++ gR+++ +k++w+ 
      Araip.GQ95T 157 KDAWTEEEELALAHYHQIYGSK-WAMIARYLP-GRSDNAIKNHWNR 200
                      689*******************.*********.***********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.1144899IPR017930Myb domain
SMARTSM007177.5E-1752101IPR001005SANT/Myb domain
SuperFamilySSF466893.59E-1654109IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-2255110IPR009057Homeodomain-like
CDDcd001672.59E-155599No hitNo description
PfamPF002496.3E-185599IPR001005SANT/Myb domain
PROSITE profilePS5129427.681100155IPR017930Myb domain
SuperFamilySSF466893.02E-31102198IPR009057Homeodomain-like
SMARTSM007179.6E-17104153IPR001005SANT/Myb domain
PfamPF002495.7E-16105151IPR001005SANT/Myb domain
CDDcd001676.24E-15108151No hitNo description
Gene3DG3DSA:1.10.10.601.7E-25111158IPR009057Homeodomain-like
PROSITE profilePS5129419.149156206IPR017930Myb domain
SMARTSM007172.7E-15156204IPR001005SANT/Myb domain
PfamPF002494.7E-15157199IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.0E-20159205IPR009057Homeodomain-like
CDDcd001673.58E-11159200No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MMLEVETELE ELSFEFDSSE GDGVHLCLSS SNCNCDATLL KSTPVSGSSK AEARRWSEEE  60
DNLLIQIVKK HEARNWKKIA AYLPGRTEVQ CLHRWQKVLD PDLVKGYWTK EEDDRLTELV  120
RKYGLKRWAE LAKFLPGRIG KQCRERWHNN LDPAIKKDAW TEEEELALAH YHQIYGSKWA  180
MIARYLPGRS DNAIKNHWNR SMKKKGDASS HLGFDLNVAT SSFRTSPIVP AHVSVKVDSH  240
SFNEMDSKHR VDNFPTHLVL QKSSKSPKRQ KVSSSDAKRD QVGNGSNNKI NSTCHNADDM  300
SNDIGCGDNN DSRDTPTMFE QSPERVLRSL AMTYENIPSI IRKRTPTKAE CAQTPEDERV  360
ITLQNLKLSR EFIPSIITTP NTKAIAKSLE GYME
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C1e-62552058158MYB PROTO-ONCOGENE PROTEIN
1h89_C1e-62552058158MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.GQ95T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF2086640.0KF208664.1 Arachis hypogaea putative 3R MYB protein 10 (MYB10) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016202089.10.0transcription factor MYB3R-3 isoform X1
RefseqXP_025653732.10.0transcription factor MYB3R-3
TrEMBLA0A444Z8P80.0A0A444Z8P8_ARAHY; Uncharacterized protein
STRINGGLYMA01G42650.11e-131(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133012528
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.21e-71myb domain protein 3r-5