PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DNI71
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 849aa    MW: 93786.1 Da    PI: 4.4456
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DNI71genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000652042123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++Cg +F++++   +H r H
  Araip.DNI71 20 HVCNKCGWPFPNPHPSAKHRRAH 42
                 79*****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002802242IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 849 aa     Download sequence    Send to blast
MDSEDQRRTQ TQGNENHGVH VCNKCGWPFP NPHPSAKHRR AHKKNCGTIE GYKLLVSEGQ  60
THLNLSDDEH FSDNDHKTQA AEESPSISKS RNDIVAQTPK ILQSERNDDC NLLELQDLKT  120
DDSFALASDS NTCRSEAMSD VLLDNKIYVD GTKGTTLKEK DEIKPDRDMF EIVESSDSTI  180
GRTFEGVSGA VTEVVSLKSQ VTDGAFILKE NNGSGFPSVM PKDLFLEAES AQSMNDSIDG  240
IRVESEHMTE LATSGDIMIS REREEVNVEM LTFPSCDDRP DVAHPHIEYE CHEPVVSQNS  300
ASLHLSKALE QGHDGLKDSV NKENDFLINQ GQLSKKGDLL SQDMHSLNSN MKKQVNCELV  360
AAEMHAEECI EVFNGESNRR LHETGAFMND MKTEKNENHV VHFSEEQVSN DAHKNSQQID  420
VPKGSLMAAS DENACDASFV SATSQTTAVI IRDNTTHHEG NITSIAVDDE CRRANIENDT  480
GICMNTLQSS NVLSEINSSS ICNEYGVEMG KFEQSDIVDA QHAESGIVKD ATLPDIFEST  540
ILSEVVIDGP KGTPKDIECS NRSPLSCTHE EIKEEEINSI DRSNEYSNIV ASTSAAPHQT  600
QDEELLHKAT EGIDLIEDSN RTGRDHSLNI EPSYQCVSPV EDTQVGQHGT KVPGVVAVPI  660
QDQRDLPVQS DVQATNEAEA IASTDLSMST ETEKSNLKYP EASEEQQYEK SEMFEPPSFM  720
TLVEPGLMLG PKSAPEVETD PNKQKPDSNS SQAAWFPTLT HIANDKKSKS PISEKDSVNQ  780
KRVRVTEDNG SGLTTVNSIL GCESPAMQIM NRESTEEWNS PADITRKKKK DKSRSHWIQL  840
LCCSSVETR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1825830RKKKKD
2825831RKKKKDK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.DNI71
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016196920.10.0uncharacterized protein LOC107638253 isoform X1
RefseqXP_025645453.10.0uncharacterized protein LOC112740940 isoform X1
TrEMBLA0A444ZBP20.0A0A444ZBP2_ARAHY; Uncharacterized protein
STRINGGLYMA08G11280.21e-139(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50511719