PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BGP1E
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 218aa    MW: 25045.7 Da    PI: 4.4165
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BGP1EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.83e-121141634490
         FAR1  44 ekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  ++ +  ++++r++++etr+gC+a+++v+ +  +g+w vt +++ HnHe+ 
  Araip.BGP1E 114 KSYDesSQRKREPKSETRCGCQAEMRVHVHIdTGRWIVTYFQEVHNHEML 163
                  433333678999****************9988***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-9110163IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MQGNFLADPS SFWIHECWAQ AGEEAYFNHN DVSLEGEALP SYLPDHENEF CDDGSYFCDA  60
EEPVSDEGKN VDFEADDFFD DNFYENWDGR SIDRIADLGS LNLKSLTVGF RELKSYDESS  120
QRKREPKSET RCGCQAEMRV HVHIDTGRWI VTYFQEVHNH EMLANELTFM LSGHRKMNAG  180
AIDQMNMMLK VGIKTPQIYA SFVNTAGSFH NVPFLKRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BGP1E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982272.11e-123protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A444X5Y41e-120A0A444X5Y4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-12FAR1-related sequence 5