PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7QK0A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 197aa    MW: 22536.8 Da    PI: 9.0313
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7QK0AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.13.2e-32120178159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vk++++prsYYrCt ++C+vkk+ver aedp++v++tYeg+H h+
  Araip.7QK0A 120 LDDGYKWRKYGQKVVKNTQHPRSYYRCTEEKCRVKKRVERLAEDPRMVITTYEGRHVHS 178
                  59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-33105178IPR003657WRKY domain
SuperFamilySSF1182902.35E-28112179IPR003657WRKY domain
PROSITE profilePS5081129.275115180IPR003657WRKY domain
SMARTSM007743.3E-36120179IPR003657WRKY domain
PfamPF031063.6E-25121177IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MFEEQVMIDE IPPPFQFGCL ESLNNNNNNK AFLGAIASPP PDLVTSSCLG ANNNSWAWGQ  60
VTAEDCVMMM RVGNKRGGDV HSHVGLGIAA MKMKMKTTKV RRKVREPRFC FKTMSDVDVL  120
DDGYKWRKYG QKVVKNTQHP RSYYRCTEEK CRVKKRVERL AEDPRMVITT YEGRHVHSPS  180
NDLQASETTS QLTDFLW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-26112177974Probable WRKY transcription factor 4
2lex_A1e-26112177974Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198104KVRRKVR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7QK0A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179187.11e-149probable WRKY transcription factor 13
RefseqXP_025685938.11e-149probable WRKY transcription factor 13
SwissprotQ9SVB72e-57WRK13_ARATH; Probable WRKY transcription factor 13
TrEMBLA0A151TQX15e-71A0A151TQX1_CAJCA; Putative WRKY transcription factor 13
STRINGPGSC0003DMT4000507452e-67(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40793361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.14e-51WRKY DNA-binding protein 13