PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7G5H2
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 662aa    MW: 72126.5 Da    PI: 6.7838
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7G5H2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.25.9e-13486527450
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveY 50 
                   hn  ErrRRdriN+++  L++l+P++      K++Ka++L +A+e 
  Araip.7G5H2 486 VHNLSERRRRDRINEKMRALQDLIPNC-----NKVDKASMLDEAIEL 527
                  5*************************8.....6************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.1E-15479527IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.33E-15481529IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.031482531IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.80E-12485526No hitNo description
PfamPF000101.6E-10486527IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-10488538IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 662 aa     Download sequence    Send to blast
MMPLHELYRK AKEKLDCSKE INSTSAPDHS TAPESDFYEL VWENGQISMQ GQSSSRGRKI  60
PTCKSLTSHC PKGLQHRDVV GYGNGTNNVN MMRMGKFGDS ESGLNEIRMP APSAEDEDVI  120
HWLNYGMDES LPHDYGSDFI HELSGVTMHE IPPLNNLSLL DKRSNSNQVL RDSHKNYARH  180
AFGSEQGILN KDFSVMARGE IEIPGPKPST SQFCQPSSYQ CQGSFASVRS KASEITENNG  240
SNPAHQVPCG ELTQIFPSAS SGFSGLKLDK QDQVMCSSSS TIMNFSHFAR PAAIVKANLQ  300
NIGLSSSRSD GIENKKKDAS ATASNPPEST KAGFSGERQK QSAVHELKVV EPSKADLKQL  360
EPSKADLKQL EPKSLEVNAT VLRQSDPARK EDVSKIYQSS NLLLCESTNK GEEAVVKNME  420
PAVASSSVCS GNGAERISGN PNQSLKRKRQ ETEDSECHSE DVEEESVDVK KAGPTRGVKR  480
SRSAEVHNLS ERRRRDRINE KMRALQDLIP NCNKVDKASM LDEAIELCQW ELVPQMHRTH  540
PPAAPMPGPS ALHGMGRSNP PVFGLPSQGL PIPTMPRAPM FSYQGEPVAN SPALRPNACG  600
TAGLTETENP ASASNQKDPV PIMQNTNGCN STSQTTKQCE AAAAGRAVDA TKKDNLVTDK  660
FD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1490495ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7G5H2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968735.20.0LOW QUALITY PROTEIN: transcription factor PIF3
TrEMBLA0A444YJC40.0A0A444YJC4_ARAHY; Uncharacterized protein
STRINGGLYMA20G22291.11e-176(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52713353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.26e-36phytochrome interacting factor 3