PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7D9KD
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 291aa    MW: 33965.4 Da    PI: 9.0122
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7D9KDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.24.1e-21180270190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fYn+YA   GF +rk+   +  ++  i++r++vC+keg ++ +  + ++++r+ r+ trt+C a+l+vk+++  g+w+v+ +++ HnH+l+
  Araip.7D9KD 180 QFYNAYACWHGFVMRKDDVVRD-NQVIIISRQLVCNKEGWKNMRYLDlDDRSREVRSLTRTKCPARLRVKLDYgCGRWKVSWFVESHNHDLT 270
                  6****************99998.77779**************9998877889999******************99***************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.5E-19180270IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MHAAELGLPT AKTEKHILCL RKRKQAAIFR ERIECGKSDL QKACRARCLL IWYGELGKVT  60
SLWEFIFYPF KFNLWLSSRV LGCYSGIWKL SKIIQFYAVA RFGALKLKRY TGVVNNWVSL  120
VGFGSGNFTC SLEDDVEDDY VDSLDSTSKS EQDCGVKRIA DLMVDDIWNL EFRIEDEACQ  180
FYNAYACWHG FVMRKDDVVR DNQVIIISRQ LVCNKEGWKN MRYLDLDDRS REVRSLTRTK  240
CPARLRVKLD YGCGRWKVSW FVESHNHDLT APNLRIWFRP IVVSLLLIKS K
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7D9KD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949233.12e-85protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025630671.12e-85protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YAV22e-82A0A444YAV2_ARAHY; Uncharacterized protein
TrEMBLA0A445EDX85e-84A0A445EDX8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-15FAR1-related sequence 5