PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.778BR
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 297aa    MW: 33959.2 Da    PI: 4.6264
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.778BRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-11175218654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr ++Pk +      K++  +iL  +++Y+k+L
  Araip.778BR 175 LMAERRRRKRLNDRLSMLRAIVPKiS------KMDRTSILGDTIDYMKEL 218
                  589*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.237169218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.33E-15172231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-11175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-9175218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.78E-4176222No hitNo description
Gene3DG3DSA:4.10.280.103.0E-15176233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.0069268296No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MEIYYDDHHD FLEELMALRR ETLMETNYDN TTFHSSFPPN SSSSSSYQQD LILPHQIYDD  60
DNFFNQIYDS LLFDEQSPPP LMMDHYSSSS YYSNNTSSNL DSYYPPLSFM EEEELQNLEI  120
ETATRCKVEP VVTVTCCDSE SPAAIFNADS VMGNKEIRKN SRSTKKVVGQ PSKNLMAERR  180
RRKRLNDRLS MLRAIVPKIS KMDRTSILGD TIDYMKELLE KINNLQQEAV KVEDSNMAGG  240
IFKDVIKPNE ILIRNSPKFA VERGVDNTRV EICCAGKPGM LLSTVNTLEA LGLDIQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177184ERRRRKRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.778BR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163755.10.0transcription factor bHLH93
TrEMBLA0A445C9120.0A0A445C912_ARAHY; Uncharacterized protein
STRINGGLYMA06G09670.16e-84(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-52beta HLH protein 93