PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.3G8AJ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 315aa    MW: 36013.1 Da    PI: 4.9569
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.3G8AJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-3094152259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  Araip.3G8AJ  94 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSTHNHP 152
                  699***********************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-3286154IPR003657WRKY domain
PROSITE profilePS5081132.00788154IPR003657WRKY domain
SuperFamilySSF1182902.09E-2689154IPR003657WRKY domain
SMARTSM007742.9E-3693153IPR003657WRKY domain
PfamPF031062.8E-2595152IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
DPLCLKLNLK NYYILSTLLA IAATDCCNKR HNIIPSTMDA NVSTKLESEE TSEELKSSET  60
QASKKRKMVE KTVVRVRIGE GNNISRLKNE GLPSDFWSWR KYGQKPIKGS PYPRGYYRCS  120
TSKGCSAKKQ VERCRTDASM LIITYTSTHN HPSPDAIIST QNLSQKPKEQ EAGETTEEEL  180
SKVEEQEQEH EHEHEQVEEE HSTDHEKPST TTVSMATADE KSFHYLQSPI SSHEDIVVVD  240
QEDPFKLSSE KSHERIDLLL EEEEPLCYAQ IKNLTTKKSD ELDFFDELEE LPMSSPFLHF  300
TRSILSDERI PVFPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-21941541779Disease resistance protein RRS1
5w3x_D1e-21941541779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.3G8AJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195771e-73EU019577.1 Glycine max WRKY41 (WRKY41) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205747.10.0probable WRKY transcription factor 65
RefseqXP_025662721.10.0probable WRKY transcription factor 65
TrEMBLA0A444YIN50.0A0A444YIN5_ARAHY; Uncharacterized protein
STRINGGLYMA19G40470.11e-121(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-36WRKY DNA-binding protein 35