PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.33FK6

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 416aa MW: 48179.4 Da PI: 6.2555

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.33FK6	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.6	7.1e-07	140	186	4	51
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke 51 n Y ++ GF +rk++ +++++ ++ t+++fvC ++g+re +k+ +e Araip.33FK6 140 NLYEQMNGFATRKARPRQNSK-KQATQQQFVCFRQGFREFAADKEAHE 186 67999********999855.559***********9887773332 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence Send to blast
MPTPLVSDAI VAFSSQRRSH SLLSSAEFIA LENGRGRCSL LFSWCNGYGR QRFVCQNKEE 60 LVFDDPNVFL GDEPSSEVGE DANKEGYSGD NIGDDFYENW KDRGIDRIAD FGRVNFKEIT 120 FDQMRLLHFP DRHVAFAFDN LYEQMNGFAT RKARPRQNSK KQATQQQFVC FRQGFREFAA 180 DKEAHEQFEA RWERLVTELQ LQDNQWVCDL YNQRKMWDSD KINMQVFAFI TWMESLGIPR 240 DHIVSLLVHL DFMEIPTSLV LERWSKNARS KVRQYVEKGL FCWDSMVTCR NWMLNNLCKE 300 MCVLTSVRED QFETVIEKVC NKITRLKHDT KIGPFSPAVV GQSSTLEGCI QDPLIVCRKK 360 RPKKGSINHT LGQQPSHVDD IDEDNNYTPN FREEVDDGVS SLPISTRGAR GTLFSR

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence Send to blast

MPTPLVSDAI VAFSSQRRSH SLLSSAEFIA LENGRGRCSL LFSWCNGYGR QRFVCQNKEE  60
LVFDDPNVFL GDEPSSEVGE DANKEGYSGD NIGDDFYENW KDRGIDRIAD FGRVNFKEIT  120
FDQMRLLHFP DRHVAFAFDN LYEQMNGFAT RKARPRQNSK KQATQQQFVC FRQGFREFAA  180
DKEAHEQFEA RWERLVTELQ LQDNQWVCDL YNQRKMWDSD KINMQVFAFI TWMESLGIPR  240
DHIVSLLVHL DFMEIPTSLV LERWSKNARS KVRQYVEKGL FCWDSMVTCR NWMLNNLCKE  300
MCVLTSVRED QFETVIEKVC NKITRLKHDT KIGPFSPAVV GQSSTLEGCI QDPLIVCRKK  360
RPKKGSINHT LGQQPSHVDD IDEDNNYTPN FREEVDDGVS SLPISTRGAR GTLFSR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.33FK6

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015966466.1	3e-76	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445AIW2	0.0	A0A445AIW2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3613	6	39