PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.05XM7
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 256aa    MW: 29025.7 Da    PI: 8.3736
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.05XM7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.81.9e-32179237159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  Araip.05XM7 179 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHT 237
                  59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-33164237IPR003657WRKY domain
SuperFamilySSF1182901.18E-28171237IPR003657WRKY domain
PROSITE profilePS5081129.516174239IPR003657WRKY domain
SMARTSM007747.1E-37179238IPR003657WRKY domain
PfamPF031063.0E-25180236IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1901141Biological Processregulation of lignin biosynthetic process
GO:1904369Biological Processpositive regulation of sclerenchyma cell differentiation
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MMSTTTTSQT MVNNQSLFGE QDHDNENMAT EMGFLPLLPT NMIFPTSPLG CNQQQPCYSL  60
LKPFSSILSP NSLASDQADS TSNLTAETLL ATDAQQKSGL DLTSTTFLGP QFLSLNRSSI  120
SNPWATGEVP DCFSSKRNVV DNHHHHVGVP TIKMKKIKGR RKVREPRFCF KTMSDVDVLD  180
DGYKWRKYGQ KVVKNTQHPR SYYRCTQDNC RVKKRVERLA EDPRMVITTY EGRHAHTPSN  240
DLEDSQPPSQ LTNFFW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-26170236874Probable WRKY transcription factor 4
2lex_A1e-26170236874Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.05XM7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193577.10.0probable WRKY transcription factor 13
RefseqXP_025637870.10.0probable WRKY transcription factor 13
SwissprotQ9SVB75e-61WRK13_ARATH; Probable WRKY transcription factor 13
TrEMBLA0A445DSA30.0A0A445DSA3_ARAHY; Uncharacterized protein
STRINGGLYMA08G15210.11e-111(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40793361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.13e-61WRKY DNA-binding protein 13