PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araha.2280s0005.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | G2-like | ||||||||
Protein Properties | Length: 357aa MW: 39558.4 Da PI: 7.1812 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.6 | 5e-32 | 215 | 270 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+++mkv+gLt+++vkSHLQkYRl+ Araha.2280s0005.1.p 215 KQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLH 270 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.821 | 212 | 272 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.61E-17 | 212 | 273 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 6.0E-28 | 213 | 273 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.1E-27 | 215 | 270 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.7E-8 | 217 | 268 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0055062 | Biological Process | phosphate ion homeostasis | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MMVEMDYAKK MQKCHEYVEA LEEEQKKIQV FQRELPLCLE LVTQAIEACR KELSGTTTTS 60 EQCSEQTISV CGGPVFEEFI PIKKRSLCEE EEEDGEHESS PELEQIGNNK KSDWLRSVQL 120 WTPSPDLNPK EERVVKKAKV VEVTPKSGAF QPFQKEKKRV LETDLQPAVK VASSTPATTT 180 SSTTETGGAK SELVKVGEEQ RQIEQQQSQS QTHRKQRRCW SPELHRRFLN ALQQLGGSHV 240 ATPKQIRDHM KVDGLTNDEV KSHLQKYRLH TRRPAAASVA AQSNGNPQQP QFVVVGGIWV 300 PSPQDFPPPS DVANNGGVYA PVAVAQSPKR SVERSCNSPA ASSSTNTNTN TSTPVS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate homeostasis. Involved in the regulation of the developmental response of lateral roots, acquisition and/or mobilization of phosphate and expression of a subset of genes involved in phosphate sensing and signaling pathway. Is a target of the transcription factor PHR1. {ECO:0000269|PubMed:27016098}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00218 | DAP | Transfer from AT1G68670 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araha.2280s0005.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced under phosphate deprivation conditions. {ECO:0000269|PubMed:27016098}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY063886 | 0.0 | AY063886.1 Arabidopsis thaliana unknown protein (At1g68670) mRNA, complete cds. | |||
GenBank | AY091241 | 0.0 | AY091241.1 Arabidopsis thaliana unknown protein (At1g68670) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020891658.1 | 0.0 | transcription factor HHO2 | ||||
Swissprot | Q8VZS3 | 0.0 | HHO2_ARATH; Transcription factor HHO2 | ||||
TrEMBL | D7KWE9 | 0.0 | D7KWE9_ARALL; Uncharacterized protein | ||||
STRING | fgenesh2_kg.2__1124__AT1G68670.1 | 0.0 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3491 | 28 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68670.1 | 1e-152 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Araha.2280s0005.1.p |
Publications ? help Back to Top | |||
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