PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.XA7KS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 332aa    MW: 36849.4 Da    PI: 6.5085
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.XA7KSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.4e-13121172155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Aradu.XA7KS 121 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 172
                  79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.63E-14119176No hitNo description
Gene3DG3DSA:4.10.280.102.0E-13120176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.459120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.68E-17120189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-10121172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-10126177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MALEAVVFPQ DPLSYTCNKD NYLYSIAASG GPWSNHEELY GNNVTDSMDQ WDSYNSNSSP  60
EPCITTIDHD QASVPGANNS PLAPVEAATS SNTIAAGAAS TGRRKRRRTK SVKNKEEIEN  120
QRMTHIAVER NRRKQMNEYL AVLRSLMPPS YVQRGDQASI IGGAINFVKE LEQLVQCMNG  180
QKKTKQEHHN NTVPFAEFFM FPQYSTHATR YCNNDNTVYP PCVEAATKKP SWSSTAAVDI  240
EVSLVDSHAN MKILSKKQHG LLVKMVIGLQ NLGFTILHLN VTTANDMVLT SVSVKVEEGS  300
QLNTVDEIAA SVNELLRTIH EEVPLYADHH QL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103107RKRRR
2103108RKRRRT
3121132RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.XA7KS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932895.10.0transcription factor bHLH96
TrEMBLA0A444Y9910.0A0A444Y991_ARAHY; Uncharacterized protein
STRINGGLYMA14G35560.11e-135(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-80bHLH family protein