PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.X77RQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 158aa    MW: 18376.1 Da    PI: 4.3733
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.X77RQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.81.1e-1574150176
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkw 76 
                  +fYn+Y+   GF +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+l+vk+++  g+w
  Aradu.X77RQ  74 QFYNAYSCWHGFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRVKLDYgCGRW 150
                  6****************99998.8888***************9998867889999****************9877888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.4E-1474150IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MSINEDDVKN DSDNDLGDDF DYQSNAEDNA EDDDVDSLDS TSKSEEVCGV KRITDLMVED  60
IWNLEFRTED EACQFYNAYS CWHGFVMRKD DVVRDNQGRI ISRQLVCNKE GWRNMRYLDM  120
DDRSREARSL TRTKCPARLR VKLDYGCGRW KSPSGKSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.X77RQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953982.11e-103protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_015965951.11e-102protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BU031e-100A0A445BU03_ARAHY; Uncharacterized protein
TrEMBLA0A445C5571e-100A0A445C557_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-12FAR1-related sequence 5