PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SU3WS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 159aa    MW: 18778.6 Da    PI: 4.2375
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SU3WSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.55.8e-2068158291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                   Yn+Y+   GF +rk+ + +  ++g+i++r++vC+ke  r+ +  + ++++r+tr+ trt+C  +l+vk+++  g+w+v+ +++ HnH+l+p
  Aradu.SU3WS  68 VYNAYSCWDGFVMRKDDMVRD-NQGRIISRQYVCNKESWRNMRYLDlDDRTRETRSLTRTKCPDRLRVKLDYgYGRWNVSCFVESHNHDLMP 158
                  7****************9998.8888***************999887899999*******************9****************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.0E-1868158IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MKNDSDNDLG DDFDYQPNAE DDAEDDDVDS LDSTSKSEEV CGVKRIADLM VEDIWSLEFR  60
TEDEACQVYN AYSCWDGFVM RKDDMVRDNQ GRIISRQYVC NKESWRNMRY LDLDDRTRET  120
RSLTRTKCPD RLRVKLDYGY GRWNVSCFVE SHNHDLMPP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SU3WS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015953982.11e-102protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_015965951.11e-100protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CSI38e-98A0A445CSI3_ARAHY; Uncharacterized protein
TrEMBLA0A445D7E19e-99A0A445D7E1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-17FAR1-related sequence 5