PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.MLK76
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 459aa    MW: 50644.9 Da    PI: 8.7589
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.MLK76genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431e-133885148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT  Ed  l ++v ++G g+W+ + +  g+ R++k+c++rw ++l
      Aradu.MLK76 38 KGPWTVSEDIMLREYVMKYGEGNWNCVQKNSGLARCGKSCRLRWANHL 85
                     79******************************************9986 PP
2Myb_DNA-binding49.87.6e-1691134146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++++eE++l+v+++++lG++ W++ a+ ++ gRt++++k++w++
      Aradu.MLK76  91 KGSFSKEEEDLIVQLHAKLGNK-WARMAAQLP-GRTDNEIKNFWNT 134
                      799*******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.1953385IPR017930Myb domain
SuperFamilySSF466891.39E-2837132IPR009057Homeodomain-like
SMARTSM007172.5E-113787IPR001005SANT/Myb domain
PfamPF002491.4E-123885IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.3E-213992IPR009057Homeodomain-like
CDDcd001671.33E-94085No hitNo description
PROSITE profilePS5129423.63986140IPR017930Myb domain
SMARTSM007171.1E-1590138IPR001005SANT/Myb domain
PfamPF002498.2E-1591134IPR001005SANT/Myb domain
CDDcd001672.80E-1193134No hitNo description
Gene3DG3DSA:1.10.10.602.5E-2493138IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MPRRINNDNN NREDNYNDGV VAKEENGGEK SLRGKTKKGP WTVSEDIMLR EYVMKYGEGN  60
WNCVQKNSGL ARCGKSCRLR WANHLRPNLK KGSFSKEEED LIVQLHAKLG NKWARMAAQL  120
PGRTDNEIKN FWNTRVKRCQ RAGLPLYPPQ VLHEANVYHL QQHLKPQPSS SSSSSFSFSP  180
LFMSSSNHQE INQLKLIAHP STNQHSSCLS YNNPQPYPQF KFPNENPNIT NSGNLGFPLS  240
PISITSSLFN QSYNNVNNNS NNDYYHLGSY NYGFHSNNSD TNNNNVKLMP NSPFEALPPL  300
IQGSNNNNEA SLSQSSPPLS STTPTSSHAS GNNGYLIGGG ASNMATNGDG GRSGVAPLSP  360
PQENGGGGLL GAVLVEAQSL CNNNDKSKSD NEDSTASQVL SHKRKYMVTT EECTKEEETN  420
NVVVESDTKS IGNTINKIPK VDLYSSPFST GKTLKFFLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-28381387106B-MYB
1h8a_C2e-282913818126MYB TRANSFORMING PROTEIN
1mse_C1e-28381384103C-Myb DNA-Binding Domain
1msf_C1e-28381384103C-Myb DNA-Binding Domain
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.MLK76
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020993388.10.0transcription factor MYB101
TrEMBLA0A445E1D40.0A0A445E1D4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF99493240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.11e-64myb domain protein 101