PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.KM9ZA
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 307aa    MW: 35063.4 Da    PI: 6.204
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.KM9ZAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83e-11133184155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ L++l+ ++   + ++ + a+i   A++++k+L+
  Aradu.KM9ZA 133 QRMTHIAVERNRRRQMNEHLSVLKSLMHPS---YIQRGDHASIIGGAIDFVKELE 184
                  79***************************9...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.95E-15131198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-11131187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.87E-9131188No hitNo description
PROSITE profilePS5088814.265132183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-8133184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-7138189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MERLQLQGPL DSSLFGEHLE VNCLEQGFVD RESNFKVKED EHEEQTLISS LEGNMPFLQM  60
LQSVESPQHL KKPWEGTPYI PTLESEINEF EQYTRSGSDA ATRLSKHHHQ ERVRKRKRGR  120
ESKDKDKEEV ENQRMTHIAV ERNRRRQMNE HLSVLKSLMH PSYIQRGDHA SIIGGAIDFV  180
KELEQLVESL EAQRRMRNKE EEDGGKEEAS GGNEAKAERR SKVGGIEVSV IQSHVNLRIQ  240
CEKRAGLLIN AIVALENLRL PILHLNITSS DSSVLYSFSL KIEEDSKLGS ANEIAEAVDK  300
ILTSLRH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133144RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.KM9ZA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015968301.10.0transcription factor bHLH67
TrEMBLA0A445CPN20.0A0A445CPN2_ARAHY; Uncharacterized protein
STRINGGLYMA07G05500.11e-103(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68943449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61950.15e-60bHLH family protein