PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.J80PY

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 464aa MW: 51560 Da PI: 6.271

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.J80PY	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.7	0.00012	357	389	17	54
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ L++l+ + +K + a++L +A+eYIk L Aradu.J80PY 357 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 389 55666677777776.....8****************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.56	340	389	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.24E-5	350	394	No hit	No description
SuperFamily	SSF47459	6.8E-11	350	405	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	9.9E-8	354	397	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence Send to blast
MADDEDFQGA AGICGENWWR SIDSTRSVFP PLTSSSPSST SPCSVAPPTD TRTWPSSDDH 60 HHCFMDLKAP ACDIISNNNN NNYHMSFHDA QEKPHNNKTT TNESQSGSML IDSTFQMMGF 120 GLSSPNWDHQ SLLENNNSQI IQKDYWSRKN FGTQQQQVSS TMDVFKRMNN QEFSSSTYGY 180 PSSTLIQTLY DPQQQPQRSS SSSSSLFTNR SMSYSSSSTV NYHHASDEVS LSPITWPKLF 240 SSSSSSSSSS LSLLPPMAKH PDNNNIGLHF SNNNTPFWNA SSDALHDIRA GAFPFEEEDN 300 KPNSPIILLN KLKSEELCVD SVKKNNNVCS SPPPFKRARI ETPPPLPTFK VRKEKLGDRV 360 TALQQLVSPF GKTDTASVLH EAIEYIKFLH DQVSVLSTPY MKSGASIQPN QECNDWKESP 420 EVAKRDLRSR GLCLVPISST FPVATEVSAD FWTPTLSFGG ALLR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence Send to blast

MADDEDFQGA AGICGENWWR SIDSTRSVFP PLTSSSPSST SPCSVAPPTD TRTWPSSDDH  60
HHCFMDLKAP ACDIISNNNN NNYHMSFHDA QEKPHNNKTT TNESQSGSML IDSTFQMMGF  120
GLSSPNWDHQ SLLENNNSQI IQKDYWSRKN FGTQQQQVSS TMDVFKRMNN QEFSSSTYGY  180
PSSTLIQTLY DPQQQPQRSS SSSSSLFTNR SMSYSSSSTV NYHHASDEVS LSPITWPKLF  240
SSSSSSSSSS LSLLPPMAKH PDNNNIGLHF SNNNTPFWNA SSDALHDIRA GAFPFEEEDN  300
KPNSPIILLN KLKSEELCVD SVKKNNNVCS SPPPFKRARI ETPPPLPTFK VRKEKLGDRV  360
TALQQLVSPF GKTDTASVLH EAIEYIKFLH DQVSVLSTPY MKSGASIQPN QECNDWKESP  420
EVAKRDLRSR GLCLVPISST FPVATEVSAD FWTPTLSFGG ALLR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.J80PY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015956247.1	0.0	transcription factor bHLH112 isoform X1
TrEMBL	A0A445DRK9	0.0	A0A445DRK9_ARAHY; Uncharacterized protein
STRING	XP_007148280.1	1e-127	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1118	33	106

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	6e-51	bHLH family protein