PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IQ81A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 2003aa    MW: 227031 Da    PI: 5.7896
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IQ81AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS353.82.6e-1083927541359
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL+ cA+avs++d++ a++lL+++++++ p gd+ qRla yf+ +L+ar+a++++++    ++ + ++ + ++ l+a+++f  ++P+ kf+h+  
  Aradu.IQ81A 392 LRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFS 489
                  5789****************************************************99998777777777777************************* PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N+++l+ +e++e++Hi+Df+i +G+QWp L++ La+R++gpp+lRiTg++ p++g   +e++eetg+rLak++++++vpfe+++++++++e++++e+L
  Aradu.IQ81A 490 NKMVLNIAEKAETLHIVDFGILYGFQWPILIKFLAKRDGGPPKLRITGIEYPQAGfrPTERIEETGRRLAKYCKRFNVPFEYKAIASRHWETIQIEDL 587
                  ******************************************************9*****************************9999********** PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  ++k +E++aVn+ ++ ++ll+e+v+++s+r++vL+l+++++P ++  +  + ++n++ Fl+rf eal +ysa++d++++ +pr++++r+++Ere+lgr
  Aradu.IQ81A 588 NIKDNEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAQTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNSWRSMLEREFLGR 685
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslv 359
                  ei+nvvaceg er+er et+++W++r ++aGF+++pl++  +++ ++ l++ +   + +  +e++++++
  Aradu.IQ81A 686 EIMNVVACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMAKFRSKLKEWYqhHKDFVFDEDNNWML 754
                  *************************************************9987566779999***9986 PP

2GRAS309.95.7e-95101313613357
         GRAS    3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98  
                   +lL++cA+av++ d+++a  +L+++++++sp+gd +qR+a+yf+ +L++rl+  ++  y   pp +    + ++ l+a+kl++ +sP+  +++ +a
  Aradu.IQ81A 1013 TLLTQCAQAVADYDKRNAYDTLKKIRQHSSPSGDGLQRMAHYFAIGLETRLNA-GTPSY---PPLDM--ASAADMLKAYKLYVTASPLQWMTNKLA 1102
                   69**************************************************9.33333...33333..34789********************** PP

         GRAS   99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192 
                    q+I + v++e+rvHiiDf+i +G+QWp+L++ L++R +gp +lRiTg++ p++g   +e++eetg+rL+ ++++ +vpfe+n  +a+++e+++le
  Aradu.IQ81A 1103 TQTIKNLVQNESRVHIIDFGICYGFQWPCLIRYLSER-NGPIKLRITGIDLPQPGfrPTERVEETGRRLETLCKRYKVPFEYNC-IAQKWETIRLE 1196
                   ************************************9.6789************9*****************************.7********** PP

         GRAS  193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 
                   +L+++++E+++Vn+ ++l++l+de+v ++s+rd+vLkl++s++P+++ +   + +++++ F +rf eal ++s+ f+++ea+ pre+ er+ +E+ 
  Aradu.IQ81A 1197 DLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMILEKG 1292
                   ************************************************************************************************ PP

         GRAS  289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357 
                    +gr++ nv+acegaer+er e++++W+ r ++aGFk+++++++ ++++k ++++ + + + v+++ ++
  Aradu.IQ81A 1293 TIGRDAINVIACEGAERVERPESYKQWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNW 1361
                   *******************************************************99899***998775 PP

3GRAS344.91.3e-105163620003373
         GRAS    3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98  
                   +lL++cA+av++ d+++a  +L+++++++sp+gd mqR+++yf+ +L++rl+    ++ + lp   +s    ++ l+a+kl++ +sP+ ++++  a
  Aradu.IQ81A 1636 SLLTQCAQAVANYDQRNAYDTLKQIRQHSSPAGDGMQRMTHYFAIGLETRLNA---GTPSYLPLDMAS---AADMLKAHKLYVTASPLQRMTNTFA 1725
                   79**************************************************9...455555666665...899********************** PP

         GRAS   99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192 
                    q+I++ v++e++vHiiDf+i +G+QWp+L++ L++R+  p +lRiTg++ p++g   +e+leetg+rL++++++ +vpfe+n  +a+++e+++le
  Aradu.IQ81A 1726 TQTIMNLVQNESCVHIIDFGICYGFQWPCLIKRLSQRNV-PIKLRITGIDLPQPGfrPAERLEETGRRLENYCKRHNVPFEYNC-IAQKWETIRLE 1819
                   *************************************55.589***********9*****************************.7********** PP

         GRAS  193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 
                   +L+++++E+++Vn+ ++l++l+de+v ++s+rd+vLkl++s++P+v+ +   + +++++ Fl+rf eal ++s+ fd++ea++pre+ er+ +E+ 
  Aradu.IQ81A 1820 DLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNVFLHGVVNGSYSAPFFLTRFREALFHFSSQFDMFEANVPREDAERMILEKG 1915
                   ************************************************************************************************ PP

         GRAS  289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 
                   l+gr++ nv+acegaer+er et+++W+ r ++aGFk+++++++ ++++k +++k + + + v+++ +++++gWk+r L ++SaW
  Aradu.IQ81A 1916 LIGRDAINVIACEGAERVERPETYKQWQIRNTRAGFKQIRVDQELVNEIKGMVKKEYHRDFVVDQDGKWVLQGWKGRILHALSAW 2000
                   *********************************************************999************************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098567.036366747IPR005202Transcription factor GRAS
PfamPF035148.9E-106392754IPR005202Transcription factor GRAS
PROSITE profilePS5098559.0399851358IPR005202Transcription factor GRAS
PfamPF035142.0E-9210131361IPR005202Transcription factor GRAS
PROSITE profilePS5098560.3416081981IPR005202Transcription factor GRAS
PfamPF035144.5E-10316362000IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 2003 aa     Download sequence    Send to blast
MDPNRVRNTD YINAYGFGDD GGALLSDFND WDLHGQYNHP FDLTPSNAFD RFDADTFGLH  60
AHAVSNSGSS EPFVPPSSAS RVEKSMPGSA FGAVASMPDP SVEDTDFSET VRYISQILLE  120
ENFEDKPCMC YNPLSLQDTE KSFYDALNQE FPLSPNEHPL DIHQNLESPD GVSAGSFPTG  180
SSGDPFSRYS CFRIGDGVFD LDPSATKLLA QNIFSNADSI LQFKRGLEEA SKFLPPGPRL  240
SIGLESSSMH AEESKRRVEK AAVPVMVEND AKERSNRVVA GPYHIVPATT KAAKNTAARS  300
LDGVKSRKHH ARQGDDGEEE RCNKQSAVSV EEESEISEMF DKVLLSVENV PLSAEQQDGL  360
VVDTQLIEQP HSSEGGRSRS KKKGRKKETV DLRTLLVLCA QAVSANDQRT ANELLKQIRQ  420
HSLPFGDAYQ RLARYFADGL EARMAGTGPG IHIFYASLSY KKFSAADFLK AYQVFISACP  480
FKKFAHFFSN KMVLNIAEKA ETLHIVDFGI LYGFQWPILI KFLAKRDGGP PKLRITGIEY  540
PQAGFRPTER IEETGRRLAK YCKRFNVPFE YKAIASRHWE TIQIEDLNIK DNEVVAVNCL  600
VRFKNLLEET VEVNSPRNAV LNLIRRINPA IFAQTVVNGS YNAPFFLTRF REALFHYSAI  660
YDMFDTLIPR NNSWRSMLER EFLGREIMNV VACEGLERVE RPETYKQWQA RNSRAGFRQL  720
PLDKALMAKF RSKLKEWYQH HKDFVFDEDN NWMLQENFPG HLQPTMNGFH SSSSSSSGTI  780
SSGDSTESIK YSNNILRYIS DILMDEEDDL ENKPCMLQQC LRLQAAEKSF SEVLGNSSNS  840
PPSQGCDESN QDGDYCRSTS FESYSSFNTD NSSYEFDWVN LVGEYESSLL QASLLGGSYG  900
THYQNMVPLI NNEEGSSPGT REKRSYQVDD DASYEQGRRG NKISATVFSN ESEPPEILDE  960
VLRIRFGRSK KYCCVEPLSK NDMLKMQNVG SNSKTARSKN RNSNTDATVD LWTLLTQCAQ  1020
AVADYDKRNA YDTLKKIRQH SSPSGDGLQR MAHYFAIGLE TRLNAGTPSY PPLDMASAAD  1080
MLKAYKLYVT ASPLQWMTNK LATQTIKNLV QNESRVHIID FGICYGFQWP CLIRYLSERN  1140
GPIKLRITGI DLPQPGFRPT ERVEETGRRL ETLCKRYKVP FEYNCIAQKW ETIRLEDLKI  1200
DRNEVTVVNC FYRLKNLPDE TVLVNSPRDA VLKLIRSINP NIFLHGVVNG SYSAPFFPTR  1260
FREALFHFSS QFNMFEANCP REDAERMILE KGTIGRDAIN VIACEGAERV ERPESYKQWQ  1320
IRNKRAGFKQ IRVDQELVNE IKGMVKNEYH RDFVVDQDGN WEPIMNGFHY EGSSYSPGTS  1380
SSEDSAEYNK YSNPILRYIS DILMEEEDDL ENKPCMLQQC LKLQAAEKSF SEVLGNSSNS  1440
IPSQGCDENN RDGDYGRTTS FESYSSCTTD HNSYESDWVN LVGEYESSLL QAPDNDSYES  1500
DWLNLLDSPN DGSSEIHYQN MVLQTNNEEG SRSGTTGTRE KRSIQVDDDT SYEQGRRGSK  1560
ISAVFSDESE PPEILDEVLR VQIGRSQCLS GVEPLPENEM PKRQNVDSVG SSGKTARSKK  1620
GSSRNSNTGA TVDLWSLLTQ CAQAVANYDQ RNAYDTLKQI RQHSSPAGDG MQRMTHYFAI  1680
GLETRLNAGT PSYLPLDMAS AADMLKAHKL YVTASPLQRM TNTFATQTIM NLVQNESCVH  1740
IIDFGICYGF QWPCLIKRLS QRNVPIKLRI TGIDLPQPGF RPAERLEETG RRLENYCKRH  1800
NVPFEYNCIA QKWETIRLED LKIDRNEVTV VNCFYRLKNL PDETVLVNSP RDAVLKLIRS  1860
INPNVFLHGV VNGSYSAPFF LTRFREALFH FSSQFDMFEA NVPREDAERM ILEKGLIGRD  1920
AINVIACEGA ERVERPETYK QWQIRNTRAG FKQIRVDQEL VNEIKGMVKK EYHRDFVVDQ  1980
DGKWVLQGWK GRILHALSAW VPA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_A1e-4837520021379Protein SCARECROW
5b3h_D1e-4837520021379Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IQ81A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169454.10.0LOW QUALITY PROTEIN: uncharacterized protein LOC107612146
SwissprotQ9XE580.0SCL14_ARATH; Scarecrow-like protein 14
TrEMBLA0A445BVH60.0A0A445BVH6_ARAHY; Uncharacterized protein
STRINGAES676280.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13134339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-174SCARECROW-like 14
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]