PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.IQ81A | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GRAS | ||||||||
Protein Properties | Length: 2003aa MW: 227031 Da PI: 5.7896 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 353.8 | 2.6e-108 | 392 | 754 | 1 | 359 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 l++lL+ cA+avs++d++ a++lL+++++++ p gd+ qRla yf+ +L+ar+a++++++ ++ + ++ + ++ l+a+++f ++P+ kf+h+ Aradu.IQ81A 392 LRTLLVLCAQAVSANDQRTANELLKQIRQHSLPFGDAYQRLARYFADGLEARMAGTGPGIHIFYASLSYKKFSAADFLKAYQVFISACPFKKFAHFFS 489 5789****************************************************99998777777777777************************* PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194 N+++l+ +e++e++Hi+Df+i +G+QWp L++ La+R++gpp+lRiTg++ p++g +e++eetg+rLak++++++vpfe+++++++++e++++e+L Aradu.IQ81A 490 NKMVLNIAEKAETLHIVDFGILYGFQWPILIKFLAKRDGGPPKLRITGIEYPQAGfrPTERIEETGRRLAKYCKRFNVPFEYKAIASRHWETIQIEDL 587 ******************************************************9*****************************9999********** PP GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292 ++k +E++aVn+ ++ ++ll+e+v+++s+r++vL+l+++++P ++ + + ++n++ Fl+rf eal +ysa++d++++ +pr++++r+++Ere+lgr Aradu.IQ81A 588 NIKDNEVVAVNCLVRFKNLLEETVEVNSPRNAVLNLIRRINPAIFAQTVVNGSYNAPFFLTRFREALFHYSAIYDMFDTLIPRNNSWRSMLEREFLGR 685 ************************************************************************************************** PP GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslv 359 ei+nvvaceg er+er et+++W++r ++aGF+++pl++ +++ ++ l++ + + + +e++++++ Aradu.IQ81A 686 EIMNVVACEGLERVERPETYKQWQARNSRAGFRQLPLDKALMAKFRSKLKEWYqhHKDFVFDEDNNWML 754 *************************************************9987566779999***9986 PP | |||||||
2 | GRAS | 309.9 | 5.7e-95 | 1013 | 1361 | 3 | 357 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 +lL++cA+av++ d+++a +L+++++++sp+gd +qR+a+yf+ +L++rl+ ++ y pp + + ++ l+a+kl++ +sP+ +++ +a Aradu.IQ81A 1013 TLLTQCAQAVADYDKRNAYDTLKKIRQHSSPSGDGLQRMAHYFAIGLETRLNA-GTPSY---PPLDM--ASAADMLKAYKLYVTASPLQWMTNKLA 1102 69**************************************************9.33333...33333..34789********************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192 q+I + v++e+rvHiiDf+i +G+QWp+L++ L++R +gp +lRiTg++ p++g +e++eetg+rL+ ++++ +vpfe+n +a+++e+++le Aradu.IQ81A 1103 TQTIKNLVQNESRVHIIDFGICYGFQWPCLIRYLSER-NGPIKLRITGIDLPQPGfrPTERVEETGRRLETLCKRYKVPFEYNC-IAQKWETIRLE 1196 ************************************9.6789************9*****************************.7********** PP GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 +L+++++E+++Vn+ ++l++l+de+v ++s+rd+vLkl++s++P+++ + + +++++ F +rf eal ++s+ f+++ea+ pre+ er+ +E+ Aradu.IQ81A 1197 DLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNIFLHGVVNGSYSAPFFPTRFREALFHFSSQFNMFEANCPREDAERMILEKG 1292 ************************************************************************************************ PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357 +gr++ nv+acegaer+er e++++W+ r ++aGFk+++++++ ++++k ++++ + + + v+++ ++ Aradu.IQ81A 1293 TIGRDAINVIACEGAERVERPESYKQWQIRNKRAGFKQIRVDQELVNEIKGMVKNEYHRDFVVDQDGNW 1361 *******************************************************99899***998775 PP | |||||||
3 | GRAS | 344.9 | 1.3e-105 | 1636 | 2000 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 +lL++cA+av++ d+++a +L+++++++sp+gd mqR+++yf+ +L++rl+ ++ + lp +s ++ l+a+kl++ +sP+ ++++ a Aradu.IQ81A 1636 SLLTQCAQAVANYDQRNAYDTLKQIRQHSSPAGDGMQRMTHYFAIGLETRLNA---GTPSYLPLDMAS---AADMLKAHKLYVTASPLQRMTNTFA 1725 79**************************************************9...455555666665...899********************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledlele 192 q+I++ v++e++vHiiDf+i +G+QWp+L++ L++R+ p +lRiTg++ p++g +e+leetg+rL++++++ +vpfe+n +a+++e+++le Aradu.IQ81A 1726 TQTIMNLVQNESCVHIIDFGICYGFQWPCLIKRLSQRNV-PIKLRITGIDLPQPGfrPAERLEETGRRLENYCKRHNVPFEYNC-IAQKWETIRLE 1819 *************************************55.589***********9*****************************.7********** PP GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 +L+++++E+++Vn+ ++l++l+de+v ++s+rd+vLkl++s++P+v+ + + +++++ Fl+rf eal ++s+ fd++ea++pre+ er+ +E+ Aradu.IQ81A 1820 DLKIDRNEVTVVNCFYRLKNLPDETVLVNSPRDAVLKLIRSINPNVFLHGVVNGSYSAPFFLTRFREALFHFSSQFDMFEANVPREDAERMILEKG 1915 ************************************************************************************************ PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 l+gr++ nv+acegaer+er et+++W+ r ++aGFk+++++++ ++++k +++k + + + v+++ +++++gWk+r L ++SaW Aradu.IQ81A 1916 LIGRDAINVIACEGAERVERPETYKQWQIRNTRAGFKQIRVDQELVNEIKGMVKKEYHRDFVVDQDGKWVLQGWKGRILHALSAW 2000 *********************************************************999************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50985 | 67.036 | 366 | 747 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 8.9E-106 | 392 | 754 | IPR005202 | Transcription factor GRAS |
PROSITE profile | PS50985 | 59.039 | 985 | 1358 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 2.0E-92 | 1013 | 1361 | IPR005202 | Transcription factor GRAS |
PROSITE profile | PS50985 | 60.34 | 1608 | 1981 | IPR005202 | Transcription factor GRAS |
Pfam | PF03514 | 4.5E-103 | 1636 | 2000 | IPR005202 | Transcription factor GRAS |
Sequence ? help Back to Top |
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Protein Sequence Length: 2003 aa Download sequence Send to blast |
MDPNRVRNTD YINAYGFGDD GGALLSDFND WDLHGQYNHP FDLTPSNAFD RFDADTFGLH 60 AHAVSNSGSS EPFVPPSSAS RVEKSMPGSA FGAVASMPDP SVEDTDFSET VRYISQILLE 120 ENFEDKPCMC YNPLSLQDTE KSFYDALNQE FPLSPNEHPL DIHQNLESPD GVSAGSFPTG 180 SSGDPFSRYS CFRIGDGVFD LDPSATKLLA QNIFSNADSI LQFKRGLEEA SKFLPPGPRL 240 SIGLESSSMH AEESKRRVEK AAVPVMVEND AKERSNRVVA GPYHIVPATT KAAKNTAARS 300 LDGVKSRKHH ARQGDDGEEE RCNKQSAVSV EEESEISEMF DKVLLSVENV PLSAEQQDGL 360 VVDTQLIEQP HSSEGGRSRS KKKGRKKETV DLRTLLVLCA QAVSANDQRT ANELLKQIRQ 420 HSLPFGDAYQ RLARYFADGL EARMAGTGPG IHIFYASLSY KKFSAADFLK AYQVFISACP 480 FKKFAHFFSN KMVLNIAEKA ETLHIVDFGI LYGFQWPILI KFLAKRDGGP PKLRITGIEY 540 PQAGFRPTER IEETGRRLAK YCKRFNVPFE YKAIASRHWE TIQIEDLNIK DNEVVAVNCL 600 VRFKNLLEET VEVNSPRNAV LNLIRRINPA IFAQTVVNGS YNAPFFLTRF REALFHYSAI 660 YDMFDTLIPR NNSWRSMLER EFLGREIMNV VACEGLERVE RPETYKQWQA RNSRAGFRQL 720 PLDKALMAKF RSKLKEWYQH HKDFVFDEDN NWMLQENFPG HLQPTMNGFH SSSSSSSGTI 780 SSGDSTESIK YSNNILRYIS DILMDEEDDL ENKPCMLQQC LRLQAAEKSF SEVLGNSSNS 840 PPSQGCDESN QDGDYCRSTS FESYSSFNTD NSSYEFDWVN LVGEYESSLL QASLLGGSYG 900 THYQNMVPLI NNEEGSSPGT REKRSYQVDD DASYEQGRRG NKISATVFSN ESEPPEILDE 960 VLRIRFGRSK KYCCVEPLSK NDMLKMQNVG SNSKTARSKN RNSNTDATVD LWTLLTQCAQ 1020 AVADYDKRNA YDTLKKIRQH SSPSGDGLQR MAHYFAIGLE TRLNAGTPSY PPLDMASAAD 1080 MLKAYKLYVT ASPLQWMTNK LATQTIKNLV QNESRVHIID FGICYGFQWP CLIRYLSERN 1140 GPIKLRITGI DLPQPGFRPT ERVEETGRRL ETLCKRYKVP FEYNCIAQKW ETIRLEDLKI 1200 DRNEVTVVNC FYRLKNLPDE TVLVNSPRDA VLKLIRSINP NIFLHGVVNG SYSAPFFPTR 1260 FREALFHFSS QFNMFEANCP REDAERMILE KGTIGRDAIN VIACEGAERV ERPESYKQWQ 1320 IRNKRAGFKQ IRVDQELVNE IKGMVKNEYH RDFVVDQDGN WEPIMNGFHY EGSSYSPGTS 1380 SSEDSAEYNK YSNPILRYIS DILMEEEDDL ENKPCMLQQC LKLQAAEKSF SEVLGNSSNS 1440 IPSQGCDENN RDGDYGRTTS FESYSSCTTD HNSYESDWVN LVGEYESSLL QAPDNDSYES 1500 DWLNLLDSPN DGSSEIHYQN MVLQTNNEEG SRSGTTGTRE KRSIQVDDDT SYEQGRRGSK 1560 ISAVFSDESE PPEILDEVLR VQIGRSQCLS GVEPLPENEM PKRQNVDSVG SSGKTARSKK 1620 GSSRNSNTGA TVDLWSLLTQ CAQAVANYDQ RNAYDTLKQI RQHSSPAGDG MQRMTHYFAI 1680 GLETRLNAGT PSYLPLDMAS AADMLKAHKL YVTASPLQRM TNTFATQTIM NLVQNESCVH 1740 IIDFGICYGF QWPCLIKRLS QRNVPIKLRI TGIDLPQPGF RPAERLEETG RRLENYCKRH 1800 NVPFEYNCIA QKWETIRLED LKIDRNEVTV VNCFYRLKNL PDETVLVNSP RDAVLKLIRS 1860 INPNVFLHGV VNGSYSAPFF LTRFREALFH FSSQFDMFEA NVPREDAERM ILEKGLIGRD 1920 AINVIACEGA ERVERPETYK QWQIRNTRAG FKQIRVDQEL VNEIKGMVKK EYHRDFVVDQ 1980 DGKWVLQGWK GRILHALSAW VPA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5b3h_A | 1e-48 | 375 | 2002 | 1 | 379 | Protein SCARECROW |
5b3h_D | 1e-48 | 375 | 2002 | 1 | 379 | Protein SCARECROW |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.IQ81A |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016169454.1 | 0.0 | LOW QUALITY PROTEIN: uncharacterized protein LOC107612146 | ||||
Swissprot | Q9XE58 | 0.0 | SCL14_ARATH; Scarecrow-like protein 14 | ||||
TrEMBL | A0A445BVH6 | 0.0 | A0A445BVH6_ARAHY; Uncharacterized protein | ||||
STRING | AES67628 | 0.0 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF131 | 34 | 339 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 1e-174 | SCARECROW-like 14 |
Publications ? help Back to Top | |||
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