PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.I7143
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 205aa    MW: 22634 Da    PI: 6.2773
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.I7143genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.00114868323
                 ETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                 C++Cg +F++++   +H r H
  Aradu.I7143 48 CHKCGWPFPNPHPSAKHRRAH 68
                 *****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002804868IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MAQSMLPKRF YHHSWTFSLR LQVLSLCCAG SKAINDPKGH ESHGVHLCHK CGWPFPNPHP  60
SAKHRRAHKM ICGTIEDYKL CSSEEQSRSN GSDDGHGSDN DKKSPGPEVL NIGNKEKGDS  120
GIGDKINRSE DEAFSDAVAD FPDSQGVKES LQEGSLDLST SMEWDGKDDP KFSESSKDSD  180
FNDSKVISQF KSSIFMCSKH MEAVV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.I7143
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979662.12e-99uncharacterized protein LOC107644337
TrEMBLA0A445DUW51e-91A0A445DUW5_ARAHY; Uncharacterized protein
STRINGGLYMA08G11280.26e-52(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50511719