PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.I59MW
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 329aa    MW: 36943.1 Da    PI: 5.0395
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.I59MWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix491.6e-15495187
     trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                 +Wt++   +L++a  ++  +l+rg+l++++W++v++ +     + ++ +r+ +qCk++++ ++k+yk +k++    + ++ss++p+f++l+a
  Aradu.I59MW  4 CWTEEASATLVDAWGRRYLELNRGNLRQKDWQDVADTVnalhgHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTASNGTVSSSWPFFEKLDA 95
                 7****************************************99999***************************999999**********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.0E-25296No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
REDCWTEEAS ATLVDAWGRR YLELNRGNLR QKDWQDVADT VNALHGHTKK THRTDVQCKN  60
RIDTIKKKYK VEKARVTASN GTVSSSWPFF EKLDALIGPN FNAKKNSSSP SPSPPVALPL  120
LPYRKASVPA VSPVTAVPPA AVALPQKRSA XXXXXXXXXX FRRNYSAMAA AAAAAEADEE  180
YEDEEEEEEE DEEEEEEDGR GSEVEEGERD REGMRRLAKA IERFGEVYER VEAQKLKQMV  240
DLEKQRMQFA KDLEVQRMQM FMDTQVQLER IKRGKRSGSN GSVIALIISE IIQGESLCVV  300
LVQADSPAEK ICIASQVSVG LIMLQLGRS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.I59MW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181520.11e-163trihelix transcription factor ASIL2
RefseqXP_025621864.11e-163trihelix transcription factor ASIL2
RefseqXP_025684331.11e-163trihelix transcription factor ASIL2
TrEMBLA0A444WYR00.0A0A444WYR0_ARAHY; Uncharacterized protein
STRINGGLYMA13G30280.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.15e-40sequence-specific DNA binding transcription factors