PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G5CUW
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 196aa    MW: 22548 Da    PI: 4.4256
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G5CUWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.51e-08139184147
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                  +fYn+Y+   GF +rk+ + +  ++g+i++r++ C+keg r+ +  +
  Aradu.G5CUW 139 QFYNAYSCWHGFVMRKDDMVRD-NQGRIISRQLICNKEGWRNMRYLD 184
                  6*****************9998.8888*************9998777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.6E-7139193IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MVAGAIIGTC FHRLGSGIDL GLHLITNKLL QVEGVYHPHF SAGYESRAVL YSLDFKLWLS  60
SRGKIMSRNE DDVKNDSDND LGDDFDYQPN AEDDAEDDNV DSLDSTSKSE EVCGVKRIAD  120
LMVEDIWNLE FRTEDEACQF YNAYSCWHGF VMRKDDMVRD NQGRIISRQL ICNKEGWRNM  180
RYLDLDDRSR EARSLT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G5CUW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992779.14e-91protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D7E12e-83A0A445D7E1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-09FAR1 family protein