PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ET2UI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 512aa    MW: 57410.3 Da    PI: 6.3044
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ET2UIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.23.8e-08410457347
                      SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                       WT++E+++++d+vk  +       W+ I + ++ ++++++++s+++++
      Aradu.ET2UI 410 LWTEDEEKKFKDVVKANPLShetcFWEQIFKSFP-TKSREDLVSYYFNV 457
                      5***************99889999**********.***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007176.8E-4407460IPR001005SANT/Myb domain
PfamPF002492.7E-6410457IPR001005SANT/Myb domain
CDDcd001671.98E-6411458No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010628Biological Processpositive regulation of gene expression
GO:0016575Biological Processhistone deacetylation
GO:0048235Biological Processpollen sperm cell differentiation
GO:0000118Cellular Componenthistone deacetylase complex
GO:0048555Cellular Componentgenerative cell nucleus
GO:0048556Cellular Componentmicrosporocyte nucleus
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MGSRPGMVVD FVSYSSFGEG EGYLSTLETW LKNISHSEFF PECGLVFGRV CFGWLMELQA  60
DILLDVCSEE EAGDSIESVC DLLDGRKLCR TNRVRCLNPE LSGSKKIVDL NSLDRKTNVA  120
SVGNLCSRNY AMDRLNNLNG SKTSVADISD AVNSMTGVSD GGKRCDSGDE DSVNKGSSGR  180
KRKRESMSEM LHWILDRAEN PCDPAMGSMP EKSKWKSYGS EEIWKQALLL REAVYLKSDH  240
PSWQGQRMHP CMYDDQVGAN YNLRERLKTD KKSTSGDGSS HAGGTEGGSE RSPTPHSSAE  300
KWSLDVPATM PIPIGPAHQA EVPEWTGMAV ESDSKWFGNQ IWPAAKVNTN LIERDPIGAG  360
RKDSCGCQFQ GSVECIQFHV AQKRAKLKLE LGDAFYMWNL HKTGEDVRRL WTEDEEKKFK  420
DVVKANPLSH ETCFWEQIFK SFPTKSREDL VSYYFNVFLL QRRGYQNRNT PNDINSDDDE  480
AEYGPLKNSF GHNTDNPRTT LLSPKKPKTK GR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ET2UI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015961821.10.0AT-rich interactive domain-containing protein 1 isoform X1
RefseqXP_015961822.10.0AT-rich interactive domain-containing protein 1 isoform X1
RefseqXP_015961823.10.0AT-rich interactive domain-containing protein 1 isoform X1
RefseqXP_015961824.10.0AT-rich interactive domain-containing protein 1 isoform X1
RefseqXP_025696228.10.0AT-rich interactive domain-containing protein 1 isoform X1
RefseqXP_025696229.10.0AT-rich interactive domain-containing protein 1 isoform X1
RefseqXP_025696230.10.0AT-rich interactive domain-containing protein 1 isoform X1
TrEMBLA0A445DD060.0A0A445DD06_ARAHY; Uncharacterized protein
STRINGXP_004492764.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF43731724