PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aradu.EC7K7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 158aa MW: 18339.1 Da PI: 4.3298 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 49.6 | 1.3e-15 | 74 | 150 | 1 | 76 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkw 76 +fYn+Y+ GF +rk+ + ++g+i++r++vC+keg r+ + + ++++r+ r+ trt+C a+l+vk+++ g+w Aradu.EC7K7 74 QFYNAYSCWHGFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLDiDDRSREARSLTRTKCPARLRVKLDYgCGRW 150 6****************99998.8888****************99987889999*****************9877888 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 9.4E-14 | 74 | 150 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 158 aa Download sequence Send to blast |
MSINEDDVKN DSDNDLGDDF DYQPNAEDDA EDDDVDSLDS TSKSEEVCGV KRIADLMVED 60 IWNLEFRTED EACQFYNAYS CWHGFVMRKD DVVRDNQGRI ISRQLVCNKE GWRNMRYLDI 120 DDRSREARSL TRTKCPARLR VKLDYGCGRW KSPSGKSS |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Aradu.EC7K7 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | HQ637177 | 0.0 | HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015964940.1 | 1e-106 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A445ENQ2 | 1e-103 | A0A445ENQ2_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9653 | 6 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 7e-12 | FAR1-related sequence 5 |