PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.8U0A6
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 328aa    MW: 37213 Da    PI: 5.6443
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.8U0A6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH261.7e-08201245655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++ r RR++i ++ +eL +l+P        K++ ae+L  A +Y+k+Lq
  Aradu.8U0A6 201 SIAARERRRKITDKTQELGKLVPGG-----SKMNTAEMLHAASKYVKYLQ 245
                  67889******************95.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.64E-12193256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.551195244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-11197254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.52E-7198248No hitNo description
SMARTSM003532.8E-9201250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-6201245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MALNTYVNGD ALQNSIISEI FTTNFHELTA PKELTPDYYY HQHNQEGLFP NNFFFDPYFD  60
LNNGFFHPEI LSYHQLGLSC TSSHDLFISP NKTEYSNVNT IFSSPKRQKY FHKDEDEERQ  120
LPPPFKEYSS PNLFDGFTMN SSSLLPSEGA ALPEELLLPA AVATPSSDFM VPNVVLNSFC  180
VGINNDSKKK KNSERTISAQ SIAARERRRK ITDKTQELGK LVPGGSKMNT AEMLHAASKY  240
VKYLQTQIGM LQLMNTLQKE DEVAPPSEDL RALITSPCVQ ENLYSEELCF VPKDFVTALT  300
NQRDIRSKPT IFKDLKELIE TNNVQKKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188209KKKNSERTISAQSIAARERRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.8U0A6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935328.10.0transcription factor bHLH52-like
TrEMBLA0A444Y8N00.0A0A444Y8N0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34593065
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.16e-33bHLH family protein